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Summary[edit source | edit]

  • pan ID?: SAUPAN003828000
  • symbol?:
  • description?: yozC
  • strand?: -
  • coordinates?: 4117509..4117712
  • synteny block?: BlockID0028850
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1364
    08BA02176:
    C248_1449
    11819-97:
    MS7_1366
    71193:
    ST398NM01_1412
    ECT-R 2:
    ECTR2_1267
    ED133:
    SAOV_1420c
    ED98:
    SAAV_1394
    HO 5096 0412:
    SAEMRSA15_12730
    JH1:
    SaurJH1_1500
    JH9:
    SaurJH9_1471
    JKD6008:
    SAA6008_01376
    JKD6159:
    SAA6159_01277
    LGA251:
    SARLGA251_13270
    M013:
    M013TW_1355
    MRSA252:
    SAR1422
    MSHR1132:
    SAMSHR1132_12510
    MSSA476:
    SAS1353
    Mu3:
    SAHV_1398
    Mu50:
    SAV1410
    MW2:
    MW1300
    RF122:
    SAB1266c
    ST398:
    SAPIG1412
    T0131:
    SAT0131_01488
    TCH60:
    HMPREF0772_11799
    TW20:
    SATW20_14110
    USA300_TCH1516:
    USA300HOU_1345
    VC40:
    SAVC_06300

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETEEYYQIIDNSGLVGGYY
    N315            MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETEEYYQIIDNSGLVGGYY
    NCTC8325        MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETEEYYQIIDNSGLVGGYY
    Newman          MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETEEYYQIIDNSGLVGGYY
    USA300_FPR3757  MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETEEYYQIIDNSGLVGGYY
                    ************************************************************

    COL             KTYFKEV
    N315            KTYFKEV
    NCTC8325        KTYFKEV
    Newman          KTYFKEV
    USA300_FPR3757  KTYFKEV
                    *******