PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003863000
• symbol^?: —
• synonym:
• description^?: hypothetical protein
• strand^?: -
• coordinates^?: 4143711..4143848
• synteny block^?: BlockID0029190
• occurrence^?: in 70% of 33 strains

⊟Orthologs

COL:
SACOL1467
N315:
SA1264
NCTC8325:
SAOUHSC_01439
Newman:
—
USA300_FPR3757:
—
04-02981:
SA2981_1385
08BA02176:
C248_1471
11819-97:
MS7_1387
6850:
—
71193:
ST398NM01_2880
ECT-R 2:
—
ED133:
SAOV_1440c
ED98:
—
HO 5096 0412:
SAEMRSA15_12940
JH1:
SaurJH1_1520
JH9:
SaurJH9_1491
JKD6008:
SAA6008_01399
JKD6159:
—
LGA251:
SARLGA251_13470
M013:
—
MRSA252:
SAR1444
MSHR1132:
—
MSSA476:
SAS1374
Mu3:
SAHV_1419
Mu50:
SAV1431
MW2:
—
RF122:
SAB1286c
ST398:
—
T0131:
SAT0131_01512
TCH60:
HMPREF0772_11775
TW20:
SATW20_14320
USA300_TCH1516:
USA300HOU_1368
VC40:
SAVC_06405

⊟Genome Viewer

COL
N315
NCTC8325

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ---------MSRILTFSEQNALAKIDDLMNTYCNQCPIKTRLRKLEGKTKAHHFCINECS
  N315            ------------MLTFSEQNTLAKIDDLMNTYCNQCPIKTRLRKLEGKTKAHHFCINECS
  NCTC8325        MQYFEVIKEVSRILTFSEQNALAKIDDLMNTYCNQCPIKTRLRKLEGKTKAHHFCINECS
                              :*******:***************************************
  
  COL             IGKEIKQLGNELQ
  N315            IGKEIKQLGNELQ
  NCTC8325        IGKEIKQLGNELQ
                  *************