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Summary[edit source | edit]

  • pan ID?: SAUPAN004131000
  • symbol?:
  • description?: 5-formyltetrahydrofolate cyclo-ligase

      descriptions from strain specific annotations:

    • 5-formyltetrahydrofolate cyclo-ligase
    • 5-formyltetrahydrofolate cyclo-ligase familyprotein
  • strand?: -
  • coordinates?: 4399589..4400128
  • synteny block?: BlockID0031610
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1508
    08BA02176:
    C248_1593
    11819-97:
    MS7_1567
    71193:
    ST398NM01_1615
    ECT-R 2:
    ECTR2_1400
    ED133:
    SAOV_1550
    ED98:
    SAAV_1542
    HO 5096 0412:
    SAEMRSA15_14700
    JH1:
    SaurJH1_1642
    JH9:
    SaurJH9_1608
    JKD6008:
    SAA6008_01519
    JKD6159:
    SAA6159_01485
    LGA251:
    SARLGA251_14560
    M013:
    M013TW_1565
    MRSA252:
    SAR1627
    MSHR1132:
    SAMSHR1132_13900
    MSSA476:
    SAS1488
    Mu3:
    SAHV_1537
    Mu50:
    SAV1550
    MW2:
    MW1502
    RF122:
    SAB1422c
    ST398:
    SAPIG1615
    T0131:
    SAT0131_01644 (ksgA)
    TCH60:
    HMPREF0772_11590 (fthC)
    TW20:
    SATW20_15460
    USA300_TCH1516:
    USA300HOU_1552
    VC40:
    SAVC_07000

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             ------------------MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEA
    N315            ------------------MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEA
    NCTC8325        ------------------MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEA
    Newman          MTCIVINDIIELNKVGDNVTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEA
    USA300_FPR3757  ------------------MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEA
                                      :*****************************************

    COL             NAIALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIY
    N315            NAIALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIY
    NCTC8325        NAIALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIY
    Newman          NAIALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIY
    USA300_FPR3757  NAIALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIY
                    ************************************************************

    COL             YPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITSFE
    N315            YPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITSFE
    NCTC8325        YPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITSFE
    Newman          YPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITSFE
    USA300_FPR3757  YPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITSFE
                    ************************************************************

    COL             PESFDQPVDKLIIYQAA
    N315            PESFDQPVDKLIIYQSA
    NCTC8325        PESFDQPVDKLIIYQAA
    Newman          PESFDQPVDKLIIYQAA
    USA300_FPR3757  PESFDQPVDKLIIYQAA
                    ***************:*