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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004199000
- symbol?: pxpA
- synonym:
- description?: LamB/YcsF family protein
- LamB/YcsF family protein
- 5-oxoprolinase subunit PxpA
- Lactam utilization protein LAMB
- lactam utilisation protein
- protein BLi00498/
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4454750..4455502
- synteny block?: BlockID0032280
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1563
08BA02176:
C248_1647
11819-97:
MS7_1621
6850:
RSAU_001467
71193:
ST398NM01_1669
ECT-R 2:
ECTR2_1454
ED133:
SAOV_1603
ED98:
SAAV_1597
HO 5096 0412:
SAEMRSA15_15230
JH1:
SaurJH1_1696
JH9:
SaurJH9_1662
JKD6008:
SAA6008_01575 (lamB)
JKD6159:
SAA6159_01538 (lamB)
LGA251:
SARLGA251_15080
M013:
M013TW_1621
MRSA252:
SAR1684
MSHR1132:
SAMSHR1132_14420
MSSA476:
SAS1541
Mu3:
SAHV_1592
Mu50:
SAV1605
MW2:
MW1555
RF122:
SAB1476c
ST398:
SAPIG1669
T0131:
SAT0131_01701 (rplL)
TCH60:
HMPREF0772_11536
TW20:
SATW20_16000
USA300_TCH1516:
USA300HOU_1605
VC40:
SAVC_07275
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG
N315 MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG
NCTC8325 MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG
Newman MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG
USA300_FPR3757 MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG
************************************************************
COL AHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAK
N315 AHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQLKINHVKPHGALYQMGAK
NCTC8325 AHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAK
Newman AHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAK
USA300_FPR3757 AHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAK
******************************************:*****************
COL DREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK
N315 DREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK
NCTC8325 DREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK
Newman DREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK
USA300_FPR3757 DREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK
************************************************************
COL ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
N315 ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
NCTC8325 ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
Newman ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
USA300_FPR3757 ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL
************************************************************
COL MKEGIDIQSL
N315 MKEGIDIQSL
NCTC8325 MKEGIDIQSL
Newman MKEGIDIQSL
USA300_FPR3757 MKEGIDIQSL
**********