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Pangenome04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

Summary[edit source | edit]

  • pan ID?: SAUPAN004271000
  • symbol?: tnpA2
  • description?: transposase A for Tn554

      descriptions from strain specific annotations:

    • transposase A for Tn554
    • transposase
    • phage integrase family protein
    • transposase A 2
    • Transposase A from transposon Tn554
    • transposase C 2
  • strand?: -
  • coordinates?: 4512809..4513894
  • synteny block?: BlockID0032950
  • occurrence?: in 31% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    SA1484 (tnpA)
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1618 (tnpA)
    08BA02176:
    11819-97:
    71193:
    ECT-R 2:
    ED133:
    ED98:
    HO 5096 0412:
    JH1:
    SaurJH1_1751
    JH9:
    SaurJH9_1717
    JKD6008:
    SAA6008_01627
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    SAR1739 (tnpA2)
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_1646 (tnpA)
    Mu50:
    SAV1659 (tnpA)
    MW2:
    RF122:
    ST398:
    T0131:
    SAT0131_01760
    TCH60:
    TW20:
    SATW20_16520 (tnpC2)
    USA300_TCH1516:
    VC40:

Genome Viewer[edit source | edit]

Alignments[edit source | edit]

  • alignment of orthologues: