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Summary[edit source | edit]

  • pan ID?: SAUPAN004282000
  • symbol?: hemL
  • description?: glutamate-1-semialdehyde aminotransferase

      descriptions from strain specific annotations:

    • glutamate-1-semialdehyde aminotransferase
    • glutamate-1-semialdehyde 2,1-aminomutase
    • Glutamate-1-semialdehyde 2,1-aminomutase 1
  • strand?: -
  • coordinates?: 4526183..4527469
  • synteny block?: BlockID0033060
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1714 (hemL1)
    N315:
    SA1491 (hemL)
    NCTC8325:
    Newman:
    NWMN_1561 (hemL)
    USA300_FPR3757:
    04-02981:
    SA2981_1627 (hemL)
    08BA02176:
    C248_1708 (hemL)
    11819-97:
    MS7_1675
    71193:
    ST398NM01_1722
    ECT-R 2:
    ECTR2_1508 (hemL)
    ED133:
    SAOV_1656
    ED98:
    SAAV_1654 (hemL1)
    HO 5096 0412:
    SAEMRSA15_15780 (hemL)
    JH1:
    SaurJH1_1759
    JH9:
    SaurJH9_1725
    JKD6008:
    SAA6008_01635 (hemL)
    JKD6159:
    SAA6159_01592 (hemL)
    LGA251:
    SARLGA251_15600 (hemL)
    M013:
    M013TW_1681
    MRSA252:
    SAR1747 (hemL)
    MSHR1132:
    SAMSHR1132_14950
    MSSA476:
    SAS1596
    Mu3:
    SAHV_1654 (hemL)
    Mu50:
    SAV1667 (hemL)
    MW2:
    MW1611 (hemL)
    RF122:
    SAB1527c (hemL)
    ST398:
    SAPIG1722 (hemL)
    T0131:
    SAT0131_01768
    TCH60:
    HMPREF0772_11483 (hemL2)
    TW20:
    SATW20_16580 (hemL)
    USA300_TCH1516:
    USA300HOU_1659 (hemL)
    VC40:
    SAVC_07545

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLS
    N315            MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLS
    NCTC8325        MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLS
    Newman          MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLS
    USA300_FPR3757  MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLS
                    ************************************************************

    COL             WGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEA
    N315            WGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEA
    NCTC8325        WGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEA
    Newman          WGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEA
    USA300_FPR3757  WGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEA
                    ************************************************************

    COL             TLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTIT
    N315            TLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTIT
    NCTC8325        TLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTIT
    Newman          TLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTIT
    USA300_FPR3757  TLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTIT
                    ************************************************************

    COL             VPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE
    N315            VPYNDLDALKIAFEKFGDDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE
    NCTC8325        VPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE
    Newman          VPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE
    USA300_FPR3757  VPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE
                    *****************:******************************************

    COL             VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTL
    N315            VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTL
    NCTC8325        VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTL
    Newman          VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTL
    USA300_FPR3757  VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTL
                    ************************************************************

    COL             SGNPLAMTSGYETLSQLTPETYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFL
    N315            SGNPLAMTSGYETLSQLTPETYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFL
    NCTC8325        SGNPLAMTSGYETLSQLTPETYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFL
    Newman          SGNPLAMTSGYETLSQLTPETYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFL
    USA300_FPR3757  SGNPLAMTSGYETLSQLTPETYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFL
                    ************************************************************

    COL             NEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEGTFLSTAHTKEDIEKTIQAFD
    N315            NEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEGTFLSTAHTKEDIEKTIQAFD
    NCTC8325        NEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEGTFLSTAHTKEDIEKTIQAFD
    Newman          NEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEGTFLSTAHTKEDIEKTIQAFD
    USA300_FPR3757  NEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEGTFLSTAHTKEDIEKTIQAFD
                    ************************************************************

    COL             TALSRIVK
    N315            TALSRIVK
    NCTC8325        TALSRIVK
    Newman          TALSRIVK
    USA300_FPR3757  TALSRIVK
                    ********