Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004297000
- symbol?: rplT
- synonym:
- description?: 50S ribosomal protein L20
- strand?: -
- coordinates?: 4539415..4539771
- synteny block?: BlockID0033210
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1638 (rplT)
08BA02176:
C248_1720 (rplT)
11819-97:
MS7_1686 (rplT)
6850:
RSAU_001537 (rplT)
71193:
ST398NM01_1733
ECT-R 2:
ECTR2_1519 (rplT)
ED133:
SAOV_1667 (rplT)
ED98:
SAAV_1666 (rplT)
HO 5096 0412:
SAEMRSA15_15890 (rplT)
JH1:
SaurJH1_1770 (rplT)
JH9:
SaurJH9_1736 (rplT)
JKD6008:
SAA6008_01646 (rplT)
JKD6159:
SAA6159_01603 (rplT)
LGA251:
SARLGA251_15710 (rplT)
M013:
M013TW_1692
MRSA252:
SAR1758 (rplT)
MSHR1132:
SAMSHR1132_15060
MSSA476:
SAS1607 (rplT)
Mu3:
SAHV_1665 (rplT)
Mu50:
SAV1678 (rplT)
MW2:
MW1622 (rplT)
RF122:
SAB1538c (rplT)
ST398:
SAPIG1733 (rplT)
T0131:
SAT0131_01781
TCH60:
HMPREF0772_11472 (rplT)
TW20:
SATW20_16690 (rplT)
USA300_TCH1516:
—
VC40:
SAVC_07600 (rplT)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKL
N315 MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKL
NCTC8325 MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKL
Newman MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKL
USA300_FPR3757 MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKL
************************************************************
COL WITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISDEKAFAQLVTKAKDALK
N315 WITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISDEKAFAQLVTKAKDALK
NCTC8325 WITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISDEKAFAQLVTKAKDALK
Newman WITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISDEKAFAQLVTKAKDALK
USA300_FPR3757 WITRINAAARQHEMSYSRLMNGLKKAGIDINRKMLSEIAISDEKAFAQLVTKAKDALK
**********************************************************