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Summary[edit source | edit]

  • pan ID?: SAUPAN004519000
  • symbol?:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 4745003..4745344
  • synteny block?: BlockID0035100
  • occurrence?: in 97% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1757
    08BA02176:
    C248_1846
    11819-97:
    MS7_1800
    71193:
    ST398NM01_1870
    ECT-R 2:
    ECTR2_1636
    ED133:
    SAOV_1782
    ED98:
    SAAV_1811
    HO 5096 0412:
    SAEMRSA15_17090
    JH1:
    SaurJH1_1888
    JH9:
    SaurJH9_1852
    JKD6008:
    SAA6008_01777
    JKD6159:
    SAA6159_01719
    LGA251:
    M013:
    M013TW_1811
    MRSA252:
    SAR1882
    MSHR1132:
    SAMSHR1132_16460
    MSSA476:
    SAS1722
    Mu3:
    SAHV_1787
    Mu50:
    SAV1802
    MW2:
    MW1740
    RF122:
    SAB1656
    ST398:
    SAPIG1870
    T0131:
    SAT0131_01918 (gntR)
    TCH60:
    HMPREF0772_11355
    TW20:
    SATW20_17910
    USA300_TCH1516:
    USA300HOU_1789
    VC40:
    SAVC_08220

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MITFENIQQLEKYTLMTMHGLFNQLKLGIISIENAEHTLFTPYMLETLSSLGVKDSIVDL
    N315            MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHTLFTPYMMESLSSLGVKPDIIDL
    NCTC8325        MITFENIQQLEKYTLMTMHGLFNQLKLGIISIENAEHTLFTPYMLETLSSLGVKDSIVDL
    Newman          MITFENIQQLEKYTLMTMHGLFNQLKLGIISIENAEHTLFTPYMLETLSSLGVKDSIVDL
    USA300_FPR3757  MITFENIQQLEKYTLMTMHGLFNQLKLGIISIENAEHTLFTPYMLETLSSLGVKDSIVDL
                    ********************************:***********:*:******* .*:**

    COL             IHKGTELEDFAAFNLSIEDTVTVCLQRTEELLKQYKNVEFNDKILINWRIIQEK
    N315            IHKGTELEDFAAFNLSIEDTVTVCLQRTEELLNQYKNVEFNDKILINWRIIQE-
    NCTC8325        IHKGTELEDFAAFNLSIEDTVTVCLQRTEELLKQYKNVEFNDKILINWRIIQEK
    Newman          IHKGTELEDFAAFNLSIEDTVTVCLQRTEELLKQYKNVEFNDKILINWRIIQEK
    USA300_FPR3757  IHKGTELEDFAAFNLSIEDTVTVCLQRTEELLKQYKNVEFNDKILINWRIIQEK
                    ********************************:********************