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Summary[edit source | edit]

  • pan ID?: SAUPAN004564000
  • symbol?: splC
  • description?: serine protease SplC

      descriptions from strain specific annotations:

    • serine protease SplC
    • peptidase S1 and S6, chymotrypsin/Hap
    • peptidase S1 and S6 chymotrypsin/Hap
    • S1B family serine protease SplC
    • serine proteinase
  • strand?: -
  • coordinates?: 4796516..4801433
  • synteny block?: BlockID0035530
  • occurrence?: in 75% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1867 (splC)
    N315:
    SA1629 (splC)
    NCTC8325:
    Newman:
    NWMN_1704 (splC)
    USA300_FPR3757:
    04-02981:
    SA2981_1766 (splC)
    08BA02176:
    11819-97:
    MS7_1812 (splC)
    71193:
    ECT-R 2:
    ECTR2_1643
    ED133:
    SAOV_1796 (splC)
    ED98:
    SAAV_1819 (splC)
    HO 5096 0412:
    JH1:
    SaurJH1_1897
    JH9:
    SaurJH9_1862
    JKD6008:
    JKD6159:
    LGA251:
    SARLGA251_16950 (splC)
    M013:
    MRSA252:
    SAR1906 (splC)
    MSHR1132:
    MSSA476:
    SAS1734
    Mu3:
    SAHV_1796 (splC)
    Mu50:
    SAV1811 (splC)
    MW2:
    MW1753 (splC)
    RF122:
    SAB1671c (splC)
    ST398:
    T0131:
    SAT0131_01930
    TCH60:
    HMPREF0772_11330 (splC)
    TW20:
    SATW20_18090 (splC)
    USA300_TCH1516:
    USA300HOU_1804 (splC)
    VC40:
    SAVC_08295

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNIFPYNGVVSFKDA
    N315            MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNNFPYNGVVSFKDA
    NCTC8325        MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNIFPYNGVVSFKDA
    Newman          MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNIFPYNGVVSFKDA
    USA300_FPR3757  MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNIFPYNGVVSFKDA
                    *********************************************** ************

    COL             TGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIE
    N315            TGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIE
    NCTC8325        TGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIE
    Newman          TGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIE
    USA300_FPR3757  TGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIE
                    ************************************************************

    COL             EQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDN
    N315            EQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDN
    NCTC8325        EQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDN
    Newman          EQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDN
    USA300_FPR3757  EQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDN
                    ************************************************************

    COL             ILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ
    N315            ILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ
    NCTC8325        ILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ
    Newman          ILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ
    USA300_FPR3757  ILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ
                    ***********************************************************