From AureoWiki
Jump to: navigation, search

Summary[edit source | edit]

  • pan ID?: SAUPAN004566000
  • symbol?: splB
  • description?: serine protease SplB

      descriptions from strain specific annotations:

    • serine protease SplB
    • peptidase S1 and S6, chymotrypsin/Hap
    • peptidase S1 and S6 chymotrypsin/Hap
    • serine proteinase
  • strand?: -
  • coordinates?: 4801491..4802213
  • synteny block?: BlockID0035550
  • occurrence?: in 69% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1868 (splB)
    N315:
    SA1630 (splB)
    NCTC8325:
    Newman:
    NWMN_1705 (splB)
    USA300_FPR3757:
    04-02981:
    SA2981_1767 (splB)
    08BA02176:
    11819-97:
    MS7_1813 (splB)
    71193:
    ECT-R 2:
    ECTR2_1644
    ED133:
    SAOV_1797
    ED98:
    SAAV_1820 (splB)
    HO 5096 0412:
    JH1:
    SaurJH1_1898
    JH9:
    SaurJH9_1863
    JKD6008:
    JKD6159:
    LGA251:
    SARLGA251_16960 (splB)
    M013:
    MRSA252:
    MSHR1132:
    MSSA476:
    SAS1735
    Mu3:
    SAHV_1797 (splB)
    Mu50:
    SAV1812 (splB)
    MW2:
    MW1754 (splB)
    RF122:
    SAB1672c
    ST398:
    T0131:
    SAT0131_01932
    TCH60:
    TW20:
    SATW20_18100 (splB)
    USA300_TCH1516:
    USA300HOU_1805 (splB)
    VC40:
    SAVC_08300

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSA
    N315            MNKNVVIKSLATLTILTSVTGIGTTLVEEVQQTAKAENNVTKIQDTNIFPYTGVVAFKSA
    NCTC8325        MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSA
    Newman          MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSA
    USA300_FPR3757  MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSA
                    ***********:******************************::****************

    COL             TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
    N315            TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
    NCTC8325        TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
    Newman          TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
    USA300_FPR3757  TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
                    ************************************************************

    COL             ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
    N315            ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
    NCTC8325        ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
    Newman          ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
    USA300_FPR3757  ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
                    ************************************************************

    COL             SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
    N315            SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
    NCTC8325        SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
    Newman          SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
    USA300_FPR3757  SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
                    ************************************************************