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Summary[edit source | edit]

  • pan ID?: saupan004754000
  • symbol?:
  • description?: hydrolase
  • strand?: -
  • coordinates?: 4969442..4969996
  • synteny block?: BlockID0036860
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1787
    08BA02176:
    C248_1871
    11819-97:
    MS7_1836
    71193:
    ST398NM01_1896
    ECT-R 2:
    ECTR2_1673
    ED133:
    SAOV_1826
    ED98:
    SAAV_1848
    HO 5096 0412:
    SAEMRSA15_17350
    JH1:
    SaurJH1_1918
    JH9:
    SaurJH9_1884
    JKD6008:
    SAA6008_01788
    JKD6159:
    SAA6159_01759
    LGA251:
    SARLGA251_17140
    M013:
    M013TW_1837
    MRSA252:
    SAR1922
    MSHR1132:
    SAMSHR1132_16770
    MSSA476:
    SAS1752
    Mu3:
    SAHV_1816
    Mu50:
    SAV1831
    MW2:
    MW1771
    RF122:
    SAB1762c
    ST398:
    SAPIG1896
    T0131:
    SAT0131_01950
    TCH60:
    HMPREF0772_11315
    TW20:
    SATW20_18250
    USA300_TCH1516:
    USA300HOU_1822
    VC40:
    SAVC_08385

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             ------MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAKTVDQWIEAMT
    N315            ------MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAKTVDQWIEAMT
    NCTC8325        ------MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAKTVDQWIEAMT
    Newman          MKGENEMTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAKTVDQWIEAMT
    USA300_FPR3757  ------MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAKTVDQWIEAMT
                          ******************************************************

    COL             KQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTI
    N315            KQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTI
    NCTC8325        KQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTI
    Newman          KQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTI
    USA300_FPR3757  KQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTI
                    ************************************************************

    COL             DYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGGHFLEEDGFETFTAL
    N315            DYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGGHFLEEDGFETFTAL
    NCTC8325        DYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLQIVEDGGHFLEEDGFETFTAL
    Newman          DYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGGHFLEEDGFETFTAL
    USA300_FPR3757  DYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGGHFLEEDGFETFTAL
                    ***************************************:********************

    COL             QDRMQDYMTR
    N315            QDRMQDYMTR
    NCTC8325        QDRMQDYMTR
    Newman          QDRMQDYMTR
    USA300_FPR3757  QDRMQDYMTR
                    **********