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Pangenome04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

Summary[edit source | edit]

  • pan ID?: SAUPAN004826000
  • symbol?:
  • description?: pseudogene

      descriptions from strain specific annotations:

    • pseudogene
    • tRNA-Gly
    • tRNA-OTHER
  • strand?: -
  • coordinates?: 5012106..5012180
  • synteny block?: BlockID0037560
  • occurrence?: in 50% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_tRNA28
    08BA02176:
    11819-97:
    MS7_1866
    71193:
    ECT-R 2:
    ECTR2_1704
    ED133:
    SAOV_1858c
    ED98:
    SAAV_1881
    HO 5096 0412:
    JH1:
    SaurJH1_R0038
    JH9:
    SaurJH9_R0038
    JKD6008:
    JKD6159:
    LGA251:
    SARLGA251_t26
    M013:
    MRSA252:
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_t0026
    Mu50:
    SAVtRNA26
    MW2:
    MWtRNA26
    RF122:
    ST398:
    T0131:
    TCH60:
    TW20:
    USA300_TCH1516:
    USA300HOU_t0026
    VC40:
    SAVC_t12515

Genome Viewer[edit source | edit]

N315 chromosome
NCTC8325 chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues: