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Summary[edit source | edit]

  • pan ID?: SAUPAN004945000
  • symbol?: nadE
  • description?: NAD synthetase

      descriptions from strain specific annotations:

    • NAD synthetase
    • NH(3)-dependent NAD(+) synthetase (Nitrogen regulatoryprotein) (Nicotinamide adenine dinucleotide synthetase) (NADS)
    • putative NAD synthetase
    • NH(3)-dependent NAD+ synthetase
  • strand?: -
  • coordinates?: 5133924..5134745
  • synteny block?: BlockID0038490
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1974 (nadE)
    N315:
    SA1728 (nadE)
    NCTC8325:
    Newman:
    NWMN_1850 (nadE)
    USA300_FPR3757:
    04-02981:
    SA2981_1869 (nadE)
    08BA02176:
    C248_1988
    11819-97:
    MS7_1947 (nadE)
    71193:
    ST398NM01_2007
    ECT-R 2:
    ECTR2_1784 (nadE)
    ED133:
    SAOV_2015
    ED98:
    SAAV_1979 (nadE)
    HO 5096 0412:
    SAEMRSA15_18220
    JH1:
    SaurJH1_2002 (nadE)
    JH9:
    SaurJH9_1968 (nadE)
    JKD6008:
    SAA6008_01933 (nadE)
    JKD6159:
    SAA6159_01844 (nadE)
    LGA251:
    SARLGA251_17970
    M013:
    M013TW_1949
    MRSA252:
    SAR2005 (nadE)
    MSHR1132:
    SAMSHR1132_17570
    MSSA476:
    SAS1836 (nadE)
    Mu3:
    SAHV_1897 (nadE)
    Mu50:
    SAV1912 (nadE)
    MW2:
    MW1853 (nadE)
    RF122:
    SAB1849c (nadE)
    ST398:
    SAPIG2007 (nadE)
    T0131:
    SAT0131_02040
    TCH60:
    HMPREF0772_11229 (nadE)
    TW20:
    SATW20_19070
    USA300_TCH1516:
    USA300HOU_1914 (nadE)
    VC40:
    SAVC_08825 (nadE)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKL
    N315            MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKL
    NCTC8325        MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKL
    Newman          MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKL
    USA300_FPR3757  MSKLQDVIVQEMKVKKRIDSAEEIMELKQFIKNYVQSHSFIKSLVLGISGGQDSTLVGKL
                    ************************************************************

    COL             VQMSVNELREEGIDCTFIAVKLPYGVQKDADEVEQALRFIEPDEIVTVNIKPAVDQSVQS
    N315            VQMSVNELREEGIDCTFIAVKLPYGVQKDADEVDQALRFIEPDEIVTVNIKPAVDQSVQS
    NCTC8325        VQMSVNELREEGIDCTFIAVKLPYGVQKDADEVEQALRFIEPDEIVTVNIKPAVDQSVQS
    Newman          VQMSVNELREEGIDCTFIAVKLPYGVQKDADEVEQALRFIEPDEIVTVNIKPAVDQSVQS
    USA300_FPR3757  VQMSVNELREEGIDCTFIAVKLPYGVQKDADEVEQALRFIEPDEIVTVNIKPAVDQSVQS
                    *********************************:**************************

    COL             LKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADI
    N315            LKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADI
    NCTC8325        LKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADI
    Newman          LKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADI
    USA300_FPR3757  LKEAGIVLTDFQKGNEKARERMKVQFSIASNRQGIVVGTDHSAENITGFYTKYGDGAADI
                    ************************************************************

    COL             APIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGK
    N315            APIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGK
    NCTC8325        APIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGK
    Newman          APIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGK
    USA300_FPR3757  APIFGLNKRQGRQLLAYLGAPKELYEKTPTADLEDDKPQLPDEDALGVTYEAIDNYLEGK
                    ************************************************************

    COL             PVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS
    N315            PVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS
    NCTC8325        PVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS
    Newman          PVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS
    USA300_FPR3757  PVTPEEQKVIENHYIRNAHKRELAYTRYTWPKS
                    *********************************