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Summary[edit source | edit]

  • pan ID?: SAUPAN005043000
  • symbol?:
  • description?: phi PVL ORF 22-like protein

      descriptions from strain specific annotations:

    • phi PVL ORF 22-like protein
    • phage protein
    • Phi PVL hypothetical protein
    • phi77 ORF044-like protein
    • phi PVL ORF22 family protein
  • strand?: -
  • coordinates?: 5205067..5205360
  • synteny block?: BlockID0039210
  • occurrence?: in 72% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1912
    08BA02176:
    11819-97:
    MS7_1983
    71193:
    ST398NM01_2915
    ECT-R 2:
    ECTR2_1823
    ED133:
    ED98:
    HO 5096 0412:
    SAEMRSA15_18660
    JH1:
    SaurJH1_2042
    JH9:
    SaurJH9_2006
    JKD6008:
    SAA6008_02004
    JKD6159:
    SAA6159_01880
    LGA251:
    M013:
    MRSA252:
    SAR2046
    MSHR1132:
    SAMSHR1132_17910
    MSSA476:
    SAS1874
    Mu3:
    SAHV_1937
    Mu50:
    SAV1951
    MW2:
    MW1891
    RF122:
    ST398:
    T0131:
    SAT0131_02083
    TCH60:
    HMPREF0772_11190
    TW20:
    SATW20_19430
    USA300_TCH1516:
    USA300HOU_1955
    VC40:

Genome Viewer[edit source | edit]

N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    N315            MALFLYKNLRRSFNMANEIIKKTERFILVQIDKEGTERVLYQDFVGSFTTSDSASYAQDF
    NCTC8325        --------------MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDF
    Newman          --------------MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDF
    USA300_FPR3757  --------------MAKEIINNTERFILVQIDKEGTERVVYQDFTGSFTTSEMVNHAQDF
                                  **:***::*****************:****.******: ..:****

    N315            KSEENAKKIAETLNLLYQLTGNQNGVKVVKEVVDRTDLSSDKSVDSETM
    NCTC8325        KSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVERSDLSPEVTVNTETV
    Newman          KSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVDRTDLSSDKTVDSETM
    USA300_FPR3757  KSEENAKKIAETLNLLYQLTNKKQRVKVVKEVVERSDLSPEVTVNTETV
                    ********************.::: ********:*:***.: :*::**: