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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005344000
- symbol?: —
- synonym:
- description?: PH domain-containing protein
- PH domain-containing protein
- membrane flanked domain protein
- bacterial membrane flanked domain family
- membrane-flanked domain-containing protein
- membrane protein
- membrane spanning protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5517708..5519291
- synteny block?: BlockID0041410
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2014 (ydbT)
08BA02176:
C248_2085
11819-97:
MS7_2090
6850:
RSAU_001913
71193:
ST398NM01_2114
ECT-R 2:
ECTR2_1929
ED133:
SAOV_2115c
ED98:
SAAV_2126
HO 5096 0412:
SAEMRSA15_19830
JH1:
SaurJH1_2148
JH9:
SaurJH9_2110
JKD6008:
SAA6008_02112
JKD6159:
SAA6159_01988
LGA251:
SARLGA251_18760
M013:
M013TW_2032
MRSA252:
SAR2161
MSHR1132:
SAMSHR1132_18980
MSSA476:
SAS1978
Mu3:
SAHV_2058
Mu50:
SAV2073
MW2:
MW1997
RF122:
SAB1958c
ST398:
SAPIG2114
T0131:
SAT0131_02230
TCH60:
HMPREF0772_11122
TW20:
SATW20_22130
USA300_TCH1516:
USA300HOU_2068
VC40:
SAVC_09250
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSEPQKLHPISYFNGIINAIKQNIVVFFIFIIFQLKDFDYTNPESYLWIGIVFVFFLISY
N315 MSEPQKLHPISYFNGIINAIKQNIVVFFIFIIFQLKDFDYTNPESYLWIGIVFVFFLISY
NCTC8325 MSEPQKLHPISYFNGIINAIKQNIVVFFIFIIFQLKDFDYTNPESYLWIGIVFVFFLISY
Newman MSEPQKLHPISYFNGIINAIKQNIVVFFIFIIFQLKDFDYTNPESYLWIGIVFVFFLISY
USA300_FPR3757 MSEPQKLHPISYFNGIINAIKQNIVVFFIFIIFQLKDFDYTNPESYLWIGIVFVFFLISY
************************************************************
COL ISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVDMTQGVVNQIIGGVDLQIK
N315 ISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVDMTQGVVNQIIGGVDLQIK
NCTC8325 ISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVDMTQGVVNQIIGGVDLQIK
Newman ISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVDMTQGVVNQIIGGVDLQIK
USA300_FPR3757 ISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVDMTQGVVNQIIGGVDLQIK
************************************************************
COL TPSDGIVLSVISKKQGEYLERYIDQLQTELKTEVAQKSSAEKNDNCNHDIEGNVEDIAEG
N315 TPSDGIVLSVISKKQGEYLERYIDQLQTELKTEVAQKSSAEKNDNCNHDIEGNVEDIAEG
NCTC8325 TPSDGIVLSVISKKQGEYLERYIDQLQTELKTEVAQKSSAEKNDNCNHDIEGNVEDIAEG
Newman TPSDGIVLSVISKKQGEYLERYIDQLQTELKTEVAQKSSAEKNDNCNHDIEGNVEDIAEG
USA300_FPR3757 TPSDGIVLSVISKKQGEYLERYIDQLQTELKTEVAQKSSAEKNDNCNHDIEGNVEDIAEG
************************************************************
COL RLDEVQNTDSMLNQKNKRIPIYQMNFKESLFMAMTSGAIGVTLAALVPIYGAVRELIPWS
N315 RLDEVQNTDSMLNQKNKRIPIYQMNFKESLFMAMTSGAIGVTLAALVPIYGAVRELIPWS
NCTC8325 RLDEVQNTDSMLNQKNKRIPIYQMNFKESLFMAMTSGAIGVTLAALVPIYGAVRELIPWS
Newman RLDEVQNTDSMLNQKNKRIPIYQMNFKESLFMAMTSGAIGVTLAALVPIYGAVRELIPWS
USA300_FPR3757 RLDEVQNTDSMLNQKNKRIPIYQMNFKESLFMAMTSGAIGVTLAALVPIYGAVRELIPWS
************************************************************
COL KLNHEISQWVQIVSISVLIIILLVLIVAYIIGTIITMIRFYGFSVMLENEQLKIEYGLFN
N315 KLNHEISQWVQIVSISVLIIILLVLIVAYIIGTIITMIRFYGFSVMLENEQLKIEYGLFN
NCTC8325 KLNHEISQWVQIVSISVLIIILLVLIVAYIIGTIITMIRFYGFSVMLENEQLKIEYGLFN
Newman KLNHEISQWVQIVSISVLIIILLVLIVEYIIGTIITMIRFYGFSVMLENEQLKIEYGLFN
USA300_FPR3757 KLNHEISQWVQIVSISVLIIILLVLIVAYIIGTIITMIRFYGFSVMLENEQLKIEYGLFN
*************************** ********************************
COL KKKVTVPTKRLQAVVERQSYIRRLFGYTAIHFIITSDFENKKIEDDDNDSGSVPILPFIK
N315 KKKVTVPTKRLQAVVERQSYIRRLFGYTAIHFIITSDFENKKIEDDDNDSGSVPILPFIK
NCTC8325 KKKVTVPTKRLQAVVERQSYIRRLFGYTAIHFIITSDFENKKIEDDDNDSGSVPILPFIK
Newman KKKVTVPTKRLQAVVERQSYIRRLFGYTAIHFIITSDFENKKIEDDDNDSGSVPILPFIK
USA300_FPR3757 KKKVTVPTKRLQAVVERQSYIRRLFGYTAIHFIITSDFENKKIEDDDNDSGSVPILPFIK
************************************************************
COL RDKAYQIIQNLVPDLSYQQVNEGMPLSGFHRHFLIPSIIVIAMAGIGCYFWNQLLLLFTI
N315 RDKAYQIIQNLVPDLSYQQVNEGMPLSGFHRHFLIPSIIVIAMAGIGCYFWNQLLLLFTI
NCTC8325 RDKAYQIIQNLVPDLSYQQVNEGMPLSGFHRHFLIPSIIVIAMAGIGCYFWNQLLLLFTI
Newman RDKAYQIIQNLVPDLSYQQVNEGMPLSGFHRHFLIPSIIVIAMAGIGCYFWNQLLLLFTI
USA300_FPR3757 RDKAYQIIQNLVPDLSYQQVNEGMPLSGFHRHFLIPSIIVIAMAGIGCYFWNQLLLLFTI
************************************************************
COL ITIVIIGLFVIKGYLYVKHAGFKMTEEQITIQNFELLKRNIYYFKAHHIIGFDTWQHTLL
N315 ITIVIIGLFVIKGYLYVKHAGFKMTEEQITIQNFELLKRNIYYFKAHHIIGFDTWQHTLL
NCTC8325 ITIVIIGLFVIKGYLYVKHAGFKMTEEQITIQNFELLKRNIYYFKAHHIIGFDTWQHTLL
Newman ITIVIIGLFVIKGYLYVKHAGFKMTEEQITIQNFELLKRNIYYFKAHHIIGFDTWQHTLL
USA300_FPR3757 ITIVIIGLFVIKGYLYVKHAGFKMTEEQITIQNFELLKRNIYYFKAHHIIGFDTWQHTLL
************************************************************
COL KRNNLNNFSFIVAKGVGAQSINLKYARSEDANKLKSWYLRGENDEGL
N315 KRNNLNNFSFIVAKGVGAQSINLKYARSEDANKLKSWYLRGENDEGL
NCTC8325 KRNNLNNFSFIVAKGVGAQSINLKYARSEDANKLKSWYLRGENDEGL
Newman KRNNLNNFSFIVAKGVGAQSINLKYARSEDANKLKSWYLRGENDEGL
USA300_FPR3757 KRNNLNNFSFIVAKGVGAQSINLKYARSEDANKLKSWYLRGENDEGL
***********************************************