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Summary[edit | edit source]

  • pan ID?: SAUPAN005435000
  • symbol?: deoD
  • synonym:
  • description?: purine nucleoside phosphorylase

      descriptions from strain specific annotations:

    • purine nucleoside phosphorylase
    • putative purine nucleoside phosphorylase
  • strand?: +
  • coordinates?: 5593955..5594665
  • synteny block?: BlockID0042300
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    SACOL2130 (deoD)
    N315:
    SA1940 (deoD)
    NCTC8325:
    Newman:
    NWMN_2042 (deoD)
    USA300_FPR3757:
    04-02981:
    SA2981_2078 (deoD)
    08BA02176:
    C248_2154 (deoD2)
    11819-97:
    MS7_2156
    6850:
    RSAU_001976 (deoD2)
    71193:
    ST398NM01_2180
    ECT-R 2:
    ECTR2_1994 (deoD)
    ED133:
    SAOV_2178
    ED98:
    SAAV_2193 (deoD)
    HO 5096 0412:
    SAEMRSA15_20460 (deoD2)
    JH1:
    SaurJH1_2212 (deoD)
    JH9:
    SaurJH9_2174 (deoD)
    JKD6008:
    SAA6008_02177 (deoD)
    JKD6159:
    SAA6159_02052 (deoD)
    LGA251:
    SARLGA251_19390 (deoD2)
    M013:
    M013TW_2098
    MRSA252:
    SAR2226 (deoD)
    MSHR1132:
    SAMSHR1132_19610
    MSSA476:
    SAS2041 (deoD)
    Mu3:
    SAHV_2122 (deoD)
    Mu50:
    SAV2138 (deoD)
    MW2:
    MW2062 (deoD)
    RF122:
    SAB2022 (deoD)
    ST398:
    SAPIG2180 (deoD)
    T0131:
    SAT0131_02303
    TCH60:
    HMPREF0772_11052 (deoD2)
    TW20:
    SATW20_22760 (deoD2)
    USA300_TCH1516:
    USA300HOU_2127 (deoD)
    VC40:
    SAVC_09565 (deoD)

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEV
    N315            MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEV
    NCTC8325        MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEV
    Newman          MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEV
    USA300_FPR3757  MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEV
                    ************************************************************

    COL             SVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVD
    N315            SVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVD
    NCTC8325        SVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVD
    Newman          SVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVD
    USA300_FPR3757  SVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVD
                    ************************************************************

    COL             QYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILG
    N315            QYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILG
    NCTC8325        QYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILG
    Newman          QYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILG
    USA300_FPR3757  QYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILG
                    ************************************************************

    COL             IEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
    N315            IEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
    NCTC8325        IEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
    Newman          IEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
    USA300_FPR3757  IEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
                    ********************************************************