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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005471000
- symbol?: —
- synonym:
- description?: HAD family phosphatase
- HAD family phosphatase
- haloacid dehalogenase-like hydrolase
- Cof-type HAD-IIB family hydrolase
- cof family hydrolase
- cof-like hydrolase family protein
- HAD hydrolase
- HAD superfamily hydrolase
- haloacid dehalogenase
- Hydrolase (HAD superfamily)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5619535..5620392
- synteny block?: BlockID0042600
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2091
08BA02176:
C248_2167
11819-97:
MS7_2168
6850:
RSAU_001989
71193:
ST398NM01_2192
ECT-R 2:
ECTR2_2006
ED133:
SAOV_2189c
ED98:
SAAV_2206
HO 5096 0412:
SAEMRSA15_20590
JH1:
SaurJH1_2223
JH9:
SaurJH9_2185
JKD6008:
SAA6008_02189
JKD6159:
SAA6159_02062
LGA251:
SARLGA251_19490
M013:
M013TW_2111
MRSA252:
SAR2240
MSHR1132:
SAMSHR1132_19710
MSSA476:
SAS2053
Mu3:
SAHV_2136
Mu50:
SAV2152
MW2:
MW2078
RF122:
SAB2032c
ST398:
SAPIG2192
T0131:
SAT0131_02316 (htrA)
TCH60:
HMPREF0772_11041
TW20:
SATW20_22880
USA300_TCH1516:
USA300HOU_2143
VC40:
SAVC_09630
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEGNIDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVP
N315 ----MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVP
NCTC8325 ----MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVP
Newman ----MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVP
USA300_FPR3757 ----MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVP
:*******************************************************
COL QDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLK
N315 QDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLK
NCTC8325 QDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLK
Newman QDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLK
USA300_FPR3757 QDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLK
************************************************************
COL EDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKIT
N315 EDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKIT
NCTC8325 EDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKIT
Newman EDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKIT
USA300_FPR3757 EDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKIT
************************************************************
COL AFRYELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDN
N315 AFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDN
NCTC8325 AFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDN
Newman AFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDN
USA300_FPR3757 AFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDN
*** ********************************************************
COL DRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAEHFLAE
N315 DRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAKHFLAD
NCTC8325 DRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAEHFLAE
Newman DRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAEHFLAE
USA300_FPR3757 DRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAEHFLAE
*******************************************:****: