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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005675000
- symbol?: rplQ
- synonym:
- description?: 50S ribosomal protein L17
- strand?: -
- coordinates?: 5797398..5797766
- synteny block?: BlockID0044210
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2161 (rplQ)
08BA02176:
C248_2259 (rplQ)
11819-97:
MS7_2243 (rplQ)
6850:
RSAU_002059 (rplQ)
71193:
ST398NM01_2276
ECT-R 2:
ECTR2_2085 (rplQ)
ED133:
SAOV_2261c
ED98:
SAAV_2285 (rplQ)
HO 5096 0412:
SAEMRSA15_21220 (rplQ)
JH1:
SaurJH1_2291 (rplQ)
JH9:
SaurJH9_2250 (rplQ)
JKD6008:
SAA6008_02260 (rplQ)
JKD6159:
SAA6159_02130 (rplQ)
LGA251:
SARLGA251_20090 (rplQ)
M013:
M013TW_2183
MRSA252:
SAR2308 (rplQ)
MSHR1132:
SAMSHR1132_20490
MSSA476:
SAS2114 (rplQ)
Mu3:
SAHV_2207 (rplQ)
Mu50:
SAV2223 (rplQ)
MW2:
MW2142 (rplQ)
RF122:
SAB2096c (rplQ)
ST398:
SAPIG2276 (rplQ)
T0131:
SAT0131_02396
TCH60:
HMPREF0772_10975 (rplQ)
TW20:
SATW20_23570 (rplQ)
USA300_TCH1516:
USA300HOU_2214 (rplQ)
VC40:
SAVC_09985 (rplQ)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVVEKLITLGKKGDLASRR
N315 MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVVEKLITLGKKGDLASRR
NCTC8325 MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVVEKLITLGKKGDLASRR
Newman MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVVEKLITLGKKGDLASRR
USA300_FPR3757 MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVVEKLITLGKKGDLASRR
************************************************************
COL NAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTRILKQGPRRGDGAESVIIE
N315 NAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTRILKQGPRRGDGAESVIIE
NCTC8325 NAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTRILKQGPRRGDGAESVIIE
Newman NAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTRILKQGPRRGDGAESVIIE
USA300_FPR3757 NAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTRILKQGPRRGDGAESVIIE
************************************************************
COL LV
N315 LV
NCTC8325 LV
Newman LV
USA300_FPR3757 LV
**