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Summary[edit source | edit]

  • pan ID?: SAUPAN005693000
  • symbol?: rpsQ
  • description?: 30S ribosomal protein S17

      descriptions from strain specific annotations:

    • 30S ribosomal protein S17
    • 30S ribosomal protein S17 (BS16)
    • 30S ribosomal protein S17p (S11e)
  • strand?: -
  • coordinates?: 5806251..5806514
  • synteny block?: BlockID0044390
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2230 (rpsQ)
    N315:
    SA2038 (rpsQ)
    NCTC8325:
    Newman:
    NWMN_2143 (rpsQ)
    USA300_FPR3757:
    04-02981:
    SA2981_2179 (rpsQ)
    08BA02176:
    C248_2277 (rpsQ)
    11819-97:
    MS7_2261 (rpsQ)
    71193:
    ST398NM01_2294
    ECT-R 2:
    ECTR2_2103
    ED133:
    SAOV_2278c
    ED98:
    SAAV_2303 (rpsQ)
    HO 5096 0412:
    SAEMRSA15_21400 (rpsQ)
    JH1:
    SaurJH1_2309 (rpsQ)
    JH9:
    SaurJH9_2268 (rpsQ)
    JKD6008:
    SAA6008_02278 (rpsQ)
    JKD6159:
    SAA6159_02148 (rpsQ)
    LGA251:
    SARLGA251_20270 (rpsQ)
    M013:
    M013TW_2200
    MRSA252:
    SAR2326 (rpsQ)
    MSHR1132:
    SAMSHR1132_20670
    MSSA476:
    SAS2132 (rpsQ)
    Mu3:
    SAHV_2225 (rpsQ)
    Mu50:
    SAV2241 (rpsQ)
    MW2:
    MW2160 (rpsQ)
    RF122:
    SAB2113c (rpsQ)
    ST398:
    SAPIG2294 (rpsQ)
    T0131:
    SAT0131_02414
    TCH60:
    HMPREF0772_10957 (rpsQ)
    TW20:
    SATW20_23750 (rpsQ)
    USA300_TCH1516:
    USA300HOU_2232 (rpsQ)
    VC40:
    SAVC_10075 (rpsQ)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
    N315            MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
    NCTC8325        MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
    Newman          MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
    USA300_FPR3757  MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
                    ************************************************************

    COL             VKIQETRPLSATKRFRLVEIVEESVII
    N315            VKIQETRPLSATKRFRIVEIVEESVII
    NCTC8325        VKIQETRPLSATKRFRLVEIVEESVII
    Newman          VKIQETRPLSATKRFRLVEIVEESVII
    USA300_FPR3757  VKIQETRPLSATKRFRLVEIVEESVII
                    ****************:**********