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Summary[edit source | edit]

  • pan ID?: SAUPAN005752000
  • symbol?:
  • description?: urea transporter

      descriptions from strain specific annotations:

    • urea transporter
    • transporter
    • putative urea transporter
    • Eukaryotic-type low-affinity urea transporter
    • membrane-bound urea transporter
    • UT family urea transporter
  • strand?: -
  • coordinates?: 5847330..5848226
  • synteny block?: BlockID0044980
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2225
    08BA02176:
    C248_2326
    11819-97:
    MS7_2305 (yut)
    71193:
    ST398NM01_2337
    ECT-R 2:
    ECTR2_2147 (yut)
    ED133:
    SAOV_2326c
    ED98:
    SAAV_2349
    HO 5096 0412:
    SAEMRSA15_21840
    JH1:
    SaurJH1_2354
    JH9:
    SaurJH9_2311
    JKD6008:
    SAA6008_02323 (utp)
    JKD6159:
    SAA6159_02191 (utp)
    LGA251:
    SARLGA251_20700
    M013:
    M013TW_2244
    MRSA252:
    SAR2371
    MSHR1132:
    SAMSHR1132_21120
    MSSA476:
    SAS2177
    Mu3:
    SAHV_2271
    Mu50:
    SAV2287
    MW2:
    MW2205
    RF122:
    SAB2159c
    ST398:
    SAPIG2337 (yut)
    T0131:
    SAT0131_02464
    TCH60:
    HMPREF0772_10911 (yut)
    TW20:
    SATW20_24180
    USA300_TCH1516:
    USA300HOU_2268
    VC40:
    SAVC_10295

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             ---MKIIDVLLKNISQVVLISNKWTGLFILIGLFVADWTIGLAAIVGSIIAYTFARFINY
    N315            ---MKIIDVLLKNISQVVLISNKWTGLFILIGLFVADWTIGLAAIVGSIIAYTFARFINY
    NCTC8325        --------MLLKNISQVVLISNKWTGLFILIGLFVADWTIGLAAIVGSIIAYTFARFINY
    Newman          MKDLKIIDVLLKNISQVVLISNKWTGLFILIGLFVADWTIGLAAIVGSIIAYTFARFINY
    USA300_FPR3757  --------MLLKNISQVVLISNKWTGLFILIGLFVADWTIGLAAIVGSIIAYTFARFINY
                            :***************************************************

    COL             SEAEINDGLAGFNPVLTAIALTIFLDKSGLDIVITMIATLLTLPVAAAVREVLRPYKVPM
    N315            SEAEVNDGLAGFNPVLTAIALTIFLDKSGLDIVITMIATLLTLPVAAAVREVLRPYKVPM
    NCTC8325        SEAEINDGLAGFNPVLTAIALTIFLDKSGLDIVITMIATLLTLPVAAAVREVLRPYKVPM
    Newman          SEAEINDGLAGFNPVLTAIALTIFLDKSGLDIVITMIATLLTLPVAAAVREVLRPYKVPM
    USA300_FPR3757  SEAEINDGLAGFNPVLTAIALTIFLDKSGLDIVITMIATLLTLPVAAAVREVLRPYKVPM
                    ****:*******************************************************

    COL             LTMPFVIVTWFTILLSGQVKFVDTSLKLMPQNIETVNFSNNDRIHFIQSLFEGFSQVFIE
    N315            LTMPFVIVTWFTILLSGQVKFVDTSLKLMPQNIETVNFSNNDRIHFIQSLFEGFSQVFIE
    NCTC8325        LTMPFVIVTWFTILLSGQVKFVDTSLKLMPQNIETVNFSNNDRIHFIQSLFEGFSQVFIE
    Newman          LTMPFVIVTWFTILLSGQVKFVDTSLKLMPQNIETVNFSNNDRIHFIQSLFEGFSQVFIE
    USA300_FPR3757  LTMPFVIVTWFTILLSGQVKFVDTSLKLMPQNIETVNFSNNDRIHFIQSLFEGFSQVFIE
                    ************************************************************

    COL             ASVIGGVCILIGILIASRKATLLAVIASLLSFIIVALLGGNYDDINQGLFGYNFVLMAIA
    N315            ASVIGGVCILIGILIASRKAALLAVIASLLSFIIVALLGGNYDDINQGLFGYNFVLMAIA
    NCTC8325        ASVIGGVCILIGILIASRKATLLAVIASLLSFIIVALLGGNYDDINQGLFGYNFVLMAIA
    Newman          ASVIGGVCILIGILIASRKATLLAVIASLLSFIIVALLGGNYDDINQGLFGYNFVLMAIA
    USA300_FPR3757  ASVIGGVCILIGILIASRKATLLAVIASLLSFIIVALLGGNYDDINQGLFGYNFVLMAIA
                    ********************:***************************************

    COL             LGYTFKTAINPYISTFLGVLLTVVVQLGTTTLLEPFGLPALTLPFIIVTWILLFAGIKHD
    N315            LGYTFKTAINPYISTFLGVLLTVVVQLGTTTLLEPFGLPALTLPFIIVTWILLFAGIKHD
    NCTC8325        LGYTFKTAINPYISTFLGVLLTVVVQLGTTTLLEPFGLPALTLPFIIVTWILLFAGIKHD
    Newman          LGYTFKTAINPYISTFLGVLLTVVVQLGTTTLLEPFGLPALTLPFIIVTWILLFAGIKHD
    USA300_FPR3757  LGYTFKTAINPYISTFLGVLLTVVVQLGTTTLLEPFGLPALTLPFIIVTWILLFAGIKHD
                    ************************************************************

    COL             KVDA
    N315            KVDA
    NCTC8325        KVDA
    Newman          KVDA
    USA300_FPR3757  KVDA
                    ****