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Summary[edit | edit source]

  • pan ID?: SAUPAN005757000
  • symbol?: ureF
  • synonym:
  • description?: urease accessory protein UreF

      descriptions from strain specific annotations:

    • urease accessory protein UreF
    • urease accessory protein UreF, putative
    • ureF family protein
  • strand?: +
  • coordinates?: 5851450..5852139
  • synteny block?: BlockID0045030
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    SACOL2284 (ureF)
    N315:
    SA2086 (ureF)
    NCTC8325:
    Newman:
    NWMN_2192 (ureF)
    USA300_FPR3757:
    04-02981:
    SA2981_2230 (ureF)
    08BA02176:
    C248_2331 (ureF)
    11819-97:
    MS7_2310
    6850:
    RSAU_002125 (ureF)
    71193:
    ST398NM01_2342
    ECT-R 2:
    ECTR2_2152
    ED133:
    SAOV_2331
    ED98:
    SAAV_2354 (ureF)
    HO 5096 0412:
    SAEMRSA15_21890 (ureF)
    JH1:
    SaurJH1_2359
    JH9:
    SaurJH9_2316
    JKD6008:
    SAA6008_02328 (ureF)
    JKD6159:
    SAA6159_02196 (ureF)
    LGA251:
    SARLGA251_20750 (ureF)
    M013:
    M013TW_2249
    MRSA252:
    SAR2376 (ureF)
    MSHR1132:
    SAMSHR1132_21170
    MSSA476:
    SAS2182
    Mu3:
    SAHV_2276 (ureF)
    Mu50:
    SAV2292 (ureF)
    MW2:
    MW2210 (ureF)
    RF122:
    SAB2164 (ureF)
    ST398:
    SAPIG2342
    T0131:
    SAT0131_02470
    TCH60:
    HMPREF0772_10906 (ureF)
    TW20:
    SATW20_24230 (ureF)
    USA300_TCH1516:
    USA300HOU_2273 (ureF)
    VC40:
    SAVC_10320

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
    N315            MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
    NCTC8325        MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
    Newman          MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
    USA300_FPR3757  MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
                    ************************************************************

    COL             LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAW
    N315            LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAW
    NCTC8325        LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAW
    Newman          LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAW
    USA300_FPR3757  LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAW
                    ************************************************************

    COL             YHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
    N315            YHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
    NCTC8325        YHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
    Newman          YHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
    USA300_FPR3757  YHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
                    ************************************************************

    COL             KIVTHMIPYIEGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
    N315            KIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
    NCTC8325        KIVTHMIPYIEGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
    Newman          KIVTHMIPYIEGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
    USA300_FPR3757  KIVTHMIPYIEGTRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
                    *********** *************************************