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Summary[edit | edit source]

  • pan ID?: SAUPAN005793000
  • symbol?:
  • synonym:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 5879982..5880540
  • synteny block?: BlockID0045380
  • occurrence?: in 94% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2253
    08BA02176:
    C248_2356
    11819-97:
    MS7_2331
    6850:
    71193:
    ST398NM01_2365
    ECT-R 2:
    ECTR2_2173
    ED133:
    SAOV_2354
    ED98:
    SAAV_2376
    HO 5096 0412:
    SAEMRSA15_22120
    JH1:
    SaurJH1_2381
    JH9:
    SaurJH9_2338
    JKD6008:
    SAA6008_02350
    JKD6159:
    SAA6159_02218
    LGA251:
    SARLGA251_20970
    M013:
    M013TW_2271
    MRSA252:
    SAR2398
    MSHR1132:
    SAMSHR1132_21390
    MSSA476:
    SAS2207
    Mu3:
    SAHV_2298
    Mu50:
    SAV2314
    MW2:
    MW2235
    RF122:
    SAB2191
    ST398:
    SAPIG2365
    T0131:
    SAT0131_02495
    TCH60:
    HMPREF0772_10881
    TW20:
    SATW20_24460
    USA300_TCH1516:
    USA300HOU_2297
    VC40:
    SAVC_10435

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MINETKYMRQQITNLIQIIDTIKYNTLMTDWNIQTHIYKFNQIVTNELNKFKGFETSYII
    N315            MINETKYMRQQITNLIQIIDTIKYNTLMTDWNIQTHIYKFNQIVTNELNKFKGFETSYII
    NCTC8325        MINETKYMRQQITNLIQIIDTIKYNTLMTDWNIQTHIYKFNQIVTNELNKFKGFETSYII
    Newman          MINETKYMRQQITNLIQIIDTIKYNTLMTDWNIQTHIYKFNQIVTNELNKFKGFETSYII
                    ************************************************************

    COL             NENQVSYYEIITLLNKRPLRQVDYGNKIQYLNFYHTELSNALFAIKFAH
    N315            NENQVSYYEIITLLNKRPLRQVDYGNKIQYLNFYHTELSNALFAIKFAH
    NCTC8325        NENQVSYYEIITLLNKRPLRQVDYGNKIQYLNFYHTELSNALFAIKFAH
    Newman          NENQVSYYEIITLLNKRPLRQVDYGNKIQYLNFYHTELSNALFAIKFAH
                    *************************************************