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Summary[edit source | edit]

  • pan ID?: SAUPAN005966000
  • symbol?: bioA
  • description?: adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA

      descriptions from strain specific annotations:

    • adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA
    • adenosylmethionine-8-amino-7-oxononanoate aminotransferase
    • putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase
    • adenosylmethionine-8-amino-7-oxononanoate transaminase
  • strand?: -
  • coordinates?: 6027434..6028792
  • synteny block?: BlockID0047100
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2427 (bioA)
    N315:
    SA2214 (bioA)
    NCTC8325:
    Newman:
    NWMN_2325 (bioA)
    USA300_FPR3757:
    04-02981:
    SA2981_2363 (bioA)
    08BA02176:
    C248_2474 (bioA)
    11819-97:
    MS7_2441 (bioA)
    71193:
    ST398NM01_2479
    ECT-R 2:
    ECTR2_2285 (bioA)
    ED133:
    SAOV_2475c
    ED98:
    SAAV_2492 (bioA)
    HO 5096 0412:
    SAEMRSA15_23250 (bioA)
    JH1:
    SaurJH1_2500
    JH9:
    SaurJH9_2452
    JKD6008:
    SAA6008_02468 (bioA)
    JKD6159:
    SAA6159_02327 (bioA)
    LGA251:
    SARLGA251_22080 (bioA)
    M013:
    M013TW_2388
    MRSA252:
    SAR2516 (bioA)
    MSHR1132:
    SAMSHR1132_22550
    MSSA476:
    SAS2317
    Mu3:
    SAHV_2410 (bioA)
    Mu50:
    SAV2426 (bioA)
    MW2:
    MW2349 (bioA)
    RF122:
    SAB2307c (bioA)
    ST398:
    SAPIG2479 (bioA)
    T0131:
    SAT0131_02621
    TCH60:
    HMPREF0772_10761 (bioA)
    TW20:
    SATW20_25560 (bioA)
    USA300_TCH1516:
    USA300HOU_2410 (bioA)
    VC40:
    SAVC_11005

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDTNGNKYLDGYASLWVNV
    N315            MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDTNGNKYLDGYASLWVNV
    NCTC8325        MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDTNGNKYLDGYASLWVNV
    Newman          MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDTNGNKYLDGYASLWVNV
    USA300_FPR3757  MNYTQQLKQKDSEYVWHPFTQMGVYSKEEAIIIEKGKGSYLYDTNGNKYLDGYASLWVNV
                    ************************************************************

    COL             HGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASV
    N315            HGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASV
    NCTC8325        HGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASV
    Newman          HGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASV
    USA300_FPR3757  HGHNNKYLNKVIKKQLNKIAHSTLLGSSNIPSIELAEKLIEITPSNLRKVFYSDTGSASV
                    ************************************************************

    COL             EIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSVGGIKTFHKIFKDLIFENI
    N315            EIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSVGGIKTFHKIFKDLIFENI
    NCTC8325        EIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSVGGIKTFHKIFKDLIFENI
    Newman          EIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSVGGIKTFHKIFKDLIFENI
    USA300_FPR3757  EIAIKMAYQYWKNIDREKYAKKNKFITLNHGYHGDTIGAVSVGGIKTFHKIFKDLIFENI
                    ************************************************************

    COL             QVESPSFYRSNYDTENEMMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFL
    N315            QVESPSFYRSNYDTENEIMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFL
    NCTC8325        QVESPSFYRSNYDTENEMMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFL
    Newman          QVESPSFYRSNYDTENEMMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFL
    USA300_FPR3757  QVESPSFYRSNYDTENEMMTAILTNIEQILIERNDEIAGFILEPLIQGATGLFVHPKGFL
                    *****************:******************************************

    COL             KEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLT
    N315            KEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLT
    NCTC8325        KEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLT
    Newman          KEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLT
    USA300_FPR3757  KEVEKLCKKYDVLLICDEVAVGFGRTGKMFACNHEDVQPDIMCLGKAITGGYLPLAATLT
                    ************************************************************

    COL             SKKIYNAFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRKLLSHIETTSSTLEKQ
    N315            SQKIYNTFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRKLLSHIETTSSTLEKQ
    NCTC8325        SKKIYNAFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRKLLSHIETTSSTLEKQ
    Newman          SKKIYNAFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRKLLSHIETTSSTLEKQ
    USA300_FPR3757  SKKIYNAFLSDSHGVNTFFHGHTYTGNQIVCTVALENIRLYEKRKLLSHIETTSSTLEKQ
                    *:****:*****************************************************

    COL             LHALKRHRNVGDVRGRGLMFGVELVTDKDSKTPLEIEKVERIVRNCKENGLMIRNLENVI
    N315            LHALKRHRNVGDVRGRGLMFGVELVTDKDSKTPLEIEKVERIVRKCKENGLMIRNLENVI
    NCTC8325        LHALKRHRNVGDVRGRGLMFGVELVTDKDSKTPLEIEKVERIVRNCKENGLMIRNLENVI
    Newman          LHALKRHRNVGDVRGRGLMFGVELVTDKDSKTPLEIEKVERIVRNCKENGLMIRNLENVI
    USA300_FPR3757  LHALKRHRNVGDVRGRGLMFGVELVTDKDSKTPLEIEKVERIVRNCKENGLMIRNLENVI
                    ********************************************:***************

    COL             TFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC
    N315            TFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC
    NCTC8325        TFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC
    Newman          TFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC
    USA300_FPR3757  TFVPVLSMSNKEVKTMVRIFKKAVHNILDRKC
                    ********************************