From AureoWiki
Jump to: navigation, search

Summary[edit source | edit]

  • pan ID?: SAUPAN006014000
  • symbol?:
  • description?: addiction module antitoxin

      descriptions from strain specific annotations:

    • addiction module antitoxin
    • prevent-host-death family protein
    • prevent-host-death protein
    • addiction module, antitoxin
    • addiction module antitoxin, Axe family
    • prevent-host-death family antitoxin
  • strand?: -
  • coordinates?: 6073510..6074158
  • synteny block?: BlockID0047580
  • occurrence?: in 81% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    NWMN_2355 (stbD)
    USA300_FPR3757:
    04-02981:
    SA2981_2394
    08BA02176:
    11819-97:
    MS7_2471
    71193:
    ECT-R 2:
    ECTR2_2315
    ED133:
    SAOV_2508c
    ED98:
    SAAV_2524
    HO 5096 0412:
    SAEMRSA15_23560
    JH1:
    SaurJH1_2533
    JH9:
    SaurJH9_2484
    JKD6008:
    SAA6008_02499 (stbD)
    JKD6159:
    SAA6159_02355 (stbD)
    LGA251:
    SARLGA251_22380
    M013:
    MRSA252:
    MSHR1132:
    MSSA476:
    SAS2349
    Mu3:
    SAHV_2441
    Mu50:
    SAV2457
    MW2:
    MW2381
    RF122:
    SAB2340c
    ST398:
    T0131:
    SAT0131_02657 (rnhB)
    TCH60:
    HMPREF0772_10731
    TW20:
    SATW20_25860
    USA300_TCH1516:
    USA300HOU_2447
    VC40:
    SAVC_11160

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGT
    N315            MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGT
    NCTC8325        MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGT
    Newman          MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGT
    USA300_FPR3757  MIITSPTEARKDFYQLLKNVNNNHEPIYISGNNAENNAVIIGLEDWKSIQETIYLESTGT
                    ************************************************************

    COL             MDKVREREKDNSGTTNIDDIDWDNL
    N315            MDKVREREKDNSGTTNIDDIDWDNL
    NCTC8325        MDKVREREKDNSGTTNIDDIDWDNL
    Newman          MDKVREREKDNSGTTNIDDIDWDNL
    USA300_FPR3757  MDKVREREKDNSGTTNIDDIDWDNL
                    *************************