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Summary[edit source | edit]

  • pan ID?: SAUPAN006058000
  • symbol?:
  • description?: IraB
  • strand?: +
  • coordinates?: 6111286..6111567
  • synteny block?: BlockID0048000
  • occurrence?: in 88% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2416
    08BA02176:
    C248_2536
    11819-97:
    MS7_2490
    71193:
    ST398NM01_2536
    ECT-R 2:
    ECTR2_2336
    ED133:
    ED98:
    SAAV_2545
    HO 5096 0412:
    SAEMRSA15_23770
    JH1:
    SaurJH1_2556
    JH9:
    SaurJH9_2506
    JKD6008:
    SAA6008_02520
    JKD6159:
    SAA6159_02375
    LGA251:
    SARLGA251_22650
    M013:
    M013TW_2440
    MRSA252:
    SAR2568
    MSHR1132:
    SAMSHR1132_23020
    MSSA476:
    SAS2371
    Mu3:
    SAHV_2463
    Mu50:
    SAV2479
    MW2:
    MW2404
    RF122:
    SAB2362
    ST398:
    SAPIG2536
    T0131:
    SAT0131_02678
    TCH60:
    HMPREF0772_10708
    TW20:
    SATW20_26060
    USA300_TCH1516:
    VC40:
    SAVC_11270

Genome Viewer[edit source | edit]

N315 chromosome
NCTC8325 chromosome
Newman chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    N315            MTYHERVLALRAESKRTAFDFRFEDLFSKEEWLSMSLAERQKAEKAFRHEVKNMDDVRMP
    NCTC8325        MTYHERVLALRAESKRTAFDFRFEDLFSKEEWLSMSLAERQKAEKAFRHEVKNMDDVRMP
    Newman          MTYHERVLALRAESKRTAFDFRFEDLFSKEEWLSMSLAERQKAEKAFRHEVKNMDDVRMP
                    ************************************************************

    N315            FSSVHDAQVKLYNVVYSYNGIKRNFKQVENEGF
    NCTC8325        FSSVHDAQVKLYNVVYSYNGIKRNFKQVENEGF
    Newman          FSSVHDAQVKLYNVVYSYNGIKRNFKQVENEGF
                    *********************************