Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN006133000
- symbol?: —
- synonym:
- description?: MerR family transcriptional regulator
- MerR family transcriptional regulator
- transcriptional regulator, putative
- transcriptional regulator MerR family protein
- Transcriptional regulator, MerR family
- merR family regulatory family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6208757..6209525
- synteny block?: BlockID0048650
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2444
08BA02176:
C248_2560
11819-97:
MS7_2511
6850:
RSAU_002345
71193:
ST398NM01_2558
ECT-R 2:
ECTR2_2360
ED133:
SAOV_2549c
ED98:
SAAV_2573
HO 5096 0412:
SAEMRSA15_24040
JH1:
SaurJH1_2583
JH9:
SaurJH9_2531
JKD6008:
SAA6008_02543
JKD6159:
SAA6159_02402
LGA251:
SARLGA251_22810
M013:
M013TW_2473
MRSA252:
SAR2585
MSHR1132:
SAMSHR1132_23260
MSSA476:
SAS2393
Mu3:
SAHV_2492
Mu50:
SAV2508
MW2:
MW2426
RF122:
SAB2380c
ST398:
SAPIG2558
T0131:
SAT0131_02706
TCH60:
HMPREF0772_10689
TW20:
SATW20_26270
USA300_TCH1516:
USA300HOU_2495
VC40:
SAVC_11405
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLG
N315 MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLG
NCTC8325 MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLG
Newman MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLG
USA300_FPR3757 MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLG
************************************************************
COL CALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLNKIKNVQYYVNEASTSPIT
N315 CALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLNKIKNVQYYVNEASTSPIT
NCTC8325 CALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLNKIKNVQYYVNEASTSPIT
Newman CALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLNKIKNVQYYVNEASTSPIT
USA300_FPR3757 CALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLNKIKNVQYYVNEASTSPIT
************************************************************
COL HLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISAILMKNKWPFLIALPFMIGYG
N315 HLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIMSSILMKNKWPFLIALPFMNCYG
NCTC8325 HLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISAILMKNKWPFLIALPFMIGYG
Newman HLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISAILMKNKWPFLIALPFMIGYG
USA300_FPR3757 HLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISAILMKNKWPFLIALPFMIGYG
*************************************:*:**************** **
COL IGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHM
N315 IGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHM
NCTC8325 IGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHM
Newman IGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHM
USA300_FPR3757 IGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHM
************************************************************
COL STEQLEISHIQHNN
N315 STEQLEISHIQHNN
NCTC8325 STEQLEISHIQHNN
Newman STEQLEISHIQHNN
USA300_FPR3757 STEQLEISHIQHNN
**************