From AureoWiki
Jump to: navigation, search
Pangenome04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

Summary[edit source | edit]

  • pan ID?: SAUPAN006279000
  • symbol?: sasK
  • description?: peptidase

      descriptions from strain specific annotations:

    • peptidase
    • cell wall anchor domain-containing protein
    • cell-wall-anchored protein SasK (LPXTG motif)
    • LPXTG-motif cell wall anchor domain-containing protein
    • lpxtg-motif protein
    • LPXTG surface-anchored protein
    • Predicted cell-wall-anchored protein SasK (LPXTG motif)
    • pseudogene
    • putative cell-wall-anchored protein SasK(LPXTG motif)
    • putative surface protein
  • strand?: -
  • coordinates?: 6328454..6328791
  • synteny block?: BlockID0050020
  • occurrence?: in 47% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2533 (sasK)
    08BA02176:
    11819-97:
    MS7_2601
    71193:
    ECT-R 2:
    ECTR2_2449
    ED133:
    SAOV_2640c
    ED98:
    SAAV_2661
    HO 5096 0412:
    SAEMRSA15_24980
    JH1:
    SaurJH1_2671
    JH9:
    SaurJH9_2617
    JKD6008:
    JKD6159:
    LGA251:
    SARLGA251_23690 (sasK)
    M013:
    M013TW_2569
    MRSA252:
    MSHR1132:
    MSSA476:
    SAS2481
    Mu3:
    SAHV_2579
    Mu50:
    SAV2595
    MW2:
    MW2515
    RF122:
    ST398:
    T0131:
    TCH60:
    TW20:
    USA300_TCH1516:
    VC40:

Genome Viewer[edit source | edit]

Alignments[edit source | edit]

  • alignment of orthologues: