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Summary[edit source | edit]

  • pan ID?: SAUPAN006373000
  • symbol?: pmi
  • description?: mannose-6-phosphate isomerase

      descriptions from strain specific annotations:

    • mannose-6-phosphate isomerase
    • mannose-6-phosphate isomerase, class I
  • strand?: +
  • coordinates?: 6410750..6411688
  • synteny block?: BlockID0050820
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2664 (manA2)
    N315:
    SA2435 (pmi)
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2581 (pmi)
    08BA02176:
    C248_2710 (pmi)
    11819-97:
    MS7_2647
    71193:
    ST398NM01_2692
    ECT-R 2:
    ECTR2_2496 (manA)
    ED133:
    SAOV_2691
    ED98:
    SAAV_2712 (manA2)
    HO 5096 0412:
    SAEMRSA15_25470 (pmi)
    JH1:
    SaurJH1_2722
    JH9:
    SaurJH9_2666
    JKD6008:
    SAA6008_02701 (pmi)
    JKD6159:
    SAA6159_02538 (pmi)
    LGA251:
    SARLGA251_24140 (pmi)
    M013:
    M013TW_2623
    MRSA252:
    SAR2721 (pmi)
    MSHR1132:
    SAMSHR1132_24660
    MSSA476:
    SAS2528
    Mu3:
    SAHV_2626 (pmi)
    Mu50:
    SAV2642 (pmi)
    MW2:
    MW2563 (pmi)
    RF122:
    SAB2517 (pmi)
    ST398:
    SAPIG2692 (manA)
    T0131:
    SAT0131_02908
    TCH60:
    HMPREF0772_10545 (pmi)
    TW20:
    SATW20_27800 (pmi)
    USA300_TCH1516:
    USA300HOU_2642 (manA2)
    VC40:
    SAVC_12090

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MALFLQPVFKDRIWGGHALKAFNYDIPNETTGECWAISAHPNGPNTIINGPYKDMTLDQL
    N315            MALFLQPVFKDRIWGGHALKAFNYDIPNETTGECWAISAHPNGPNTIINGPYKDMTLDQL
    NCTC8325        MALFLQPVFKDRIWGGHALKAFNYDIPNETTGECWAISAHPNGPNTIINGPYKDMTLDQL
    Newman          MALFLQPVFKDRIWGGHALKAFNYDIPNETTGECWAISAHPNGPNTIINGPYKDMTLDQL
    USA300_FPR3757  MALFLQPVFKDRIWGGHALKAFNYDIPNETTGECWAISAHPNGPNTIINGPYKDMTLDQL
                    ************************************************************

    COL             WSQHRELFDNDSRDSFPLLTKVLDANDKLSVQVHPDDDYALKHEGELGKTECWYILDAAP
    N315            WSQHRELFDNDSRDSFPLLTKVLDANDKLSVQVHPDDDYALKHEGELGKTECWYILDAAP
    NCTC8325        WSQHRELFDNDSRDSFPLLTKVLDANDKLSVQVHPDDDYALKHEGELGKTECWYILDAAP
    Newman          WSQHRELFDNDSRDSFPLLTKVLDANDKLSVQVHPDDDYALKHEGELGKTECWYILDAAP
    USA300_FPR3757  WSQHRELFDNDSRDSFPLLTKVLDANDKLSVQVHPDDDYALKHEGELGKTECWYILDAAP
                    ************************************************************

    COL             GAEIIYGVHAHNKQTLIDMIDNHEFDSLFKRIPVKPGDFYYVPAGTVHAIGSGILILETQ
    N315            GAEIIYGVHAHNKQTLIDMIDNHEFDSLFKRIPVKPGDFYYVPAGTVHAIGSGILILETQ
    NCTC8325        GAEIIYGVHAHNKQTLIDMIDNHEFDSLFKRIPVKPGDFYYVPAGTVHAIGSGILILETQ
    Newman          GAEIIYGVHAHNKQTLIDMIDNHEFDSLFKRIPVKPGDFYYVPAGTVHAIGSGILILETQ
    USA300_FPR3757  GAEIIYGVHAHNKQTLIDMIDNHEFDSLFKRIPVKPGDFYYVPAGTVHAIGSGILILETQ
                    ************************************************************

    COL             QSSDTTYRIYDYDRRDQNGQLRDLHLEQSKDVIELGNHEPNTTPITTHIDTHTVTQFVDN
    N315            QSSDTTYRIYDYDRRDQNGQLRDLHLEQSKDVIELGNHEPNTTPITTHIDTHTVTQFVDN
    NCTC8325        QSSDTTYRIYDYDRRDQNGQLRDLHLEQSKDVIELGNHEPNTTPITTHIDTHTVTQFVDN
    Newman          QSSDTTYRIYDYDRRDQNGQLRDLHLEQSKDVIELGNHEPNTTPITTHIDTHTVTQFVDN
    USA300_FPR3757  QSSDTTYRIYDYDRRDQNGQLRDLHLEQSKDVIELGNHEPNTTPITTHIDTHTVTQFVDN
                    ************************************************************

    COL             QYFAVYKWDIHGDLKFNKPHAYCLVTIIDGTGTLTVNDKHYDIQKGSSFILTTEDEDIHF
    N315            QYFAVYKWDIHGDLKFNKPHAYCLVTIIDGTGTLTVNDKHYDIQKGSSFILTTEDEDIHF
    NCTC8325        QYFAVYKWDIHGDLKFNKPHAYCLVTIIDGTGTLTVNDKHYDIQKGSSFILTTEDEDIHF
    Newman          QYFAVYKWDIHGDLKFNKPHAYCLVTIIDGTGTLTVNDKHYDIQKGSSFILTTEDEDIHF
    USA300_FPR3757  QYFAVYKWDIHGDLKFNKPHAYCLVTIIDGTGTLTVNDKHYDIQKGSSFILTTEDEDIHF
                    ************************************************************

    COL             VGNISAIVSHPG
    N315            VGNISAIVSHPG
    NCTC8325        VGNISAIVSHPG
    Newman          VGNISAIVSHPG
    USA300_FPR3757  VGNISAIVSHPG
                    ************