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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006384000
- symbol?: asp3
- synonym:
- description?: accessory Sec system protein Asp3
- accessory Sec system protein Asp3
- accessory secretory protein Asp3
- accessory Sec system asp3
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6427057..6428016
- synteny block?: BlockID0050920
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2589 (asp3)
08BA02176:
C248_2718
11819-97:
MS7_2655 (asp3)
6850:
RSAU_002493 (asp3)
71193:
ST398NM01_2700
ECT-R 2:
ECTR2_2504
ED133:
SAOV_2701c
ED98:
SAAV_2720
HO 5096 0412:
SAEMRSA15_25550
JH1:
SaurJH1_2730
JH9:
SaurJH9_2674
JKD6008:
SAA6008_02709 (asp3)
JKD6159:
SAA6159_02546 (asp3)
LGA251:
SARLGA251_24220
M013:
M013TW_2631
MRSA252:
SAR2729
MSHR1132:
SAMSHR1132_24740
MSSA476:
SAS2536
Mu3:
SAHV_2634
Mu50:
SAV2650
MW2:
MW2571
RF122:
SAB2525c
ST398:
SAPIG2700
T0131:
SAT0131_02919
TCH60:
HMPREF0772_10537 (asp3)
TW20:
SATW20_27880
USA300_TCH1516:
USA300HOU_2650
VC40:
SAVC_12130
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---------------------------MLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVT
N315 MMIHLPLQVGLLIFTTLFWKTSLGEFNMLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVT
NCTC8325 ---------------------------MLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVT
Newman ---------------------------MLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVT
USA300_FPR3757 ---------------------------MLKNKTFKVTWNYISQTTFMYGSKVSFSNGEVT
*********************************
COL FINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFY
N315 FINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFY
NCTC8325 FINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFY
Newman FINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFY
USA300_FPR3757 FINPLMPSGLPIHEWLMLKQFSKYKSAPSLPILRRGQHYKLHFDFDATPAGSVYFIIIFY
************************************************************
COL NKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQYDLEYKS
N315 NKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQDDLEYKS
NCTC8325 NKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQYDLEYKS
Newman NKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQYDLEYKS
USA300_FPR3757 NKNGTKLSTEIVKSNSITIQYPDEAYAYKIKMMNAASTSLIFRCLTITEMTHQYDLEYKS
***************************************************** ******
COL MRVTKIGDDQYGNDMINVIIAEPSDTYPTISNDFLKLFGHVWLVERWMDDNIEGNIKQLK
N315 MRVTKIDDNQYGNDRINVIIAEPSDTYPTISNDFLKLFGHVWLVERWMDDDIKENIKQLK
NCTC8325 MRVTKIGDDQYGNDMINVIIAEPSDTYPTISNDFLKLFGHVWLVERWMDDNIEGNIKQLK
Newman MRVTKIGDDQYGNDMINVIIAEPSDTYPTISNDFLKLFGHVWLVERWMDDNIEGNIKQLK
USA300_FPR3757 MRVTKIGDDQYGNDMINVIIAEPSDTYPTISNDFLKLFGHVWLVERWMDDNIEGNIKQLK
******.*:***** ***********************************:*: ******
COL NDLQSQDTLKAINLISYGSKSNVFATYVAQHLGCKVYRTSHEDDDLKGWLTEHVPGNHEL
N315 DDLQSQDTLTAINLISYGSKSNVFATYVAQHLDCKVYRTSHEDDDLKEWLTEHVPGNNEL
NCTC8325 NDLQSQDTLKAINLISYGSKSNVFATYVAQHLGCKVYRTSHEDDDLKGWLTEHVPGNHEL
Newman NDLQSQDTLKAINLISYGSKSNVFVTYVAQHLGCKVYRTSHEDDDLKGWLTEHVPGNHEL
USA300_FPR3757 NDLQSQDTLKAINLISYGSKSNVFATYVAQHLGCKVYRTSHEDDDLKGWLTEHVPGNHEL
:********.**************.*******.************** *********:**
COL KDTNVEVYFKEEQDKHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET
N315 KDTNVEFYFKEEQDNHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET
NCTC8325 KDTNVEVYFKEEQDKHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET
Newman KDTNVEVYFKEEQDKHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET
USA300_FPR3757 KDTNVEVYFKEEQDKHLNYMSRLMNPVRFLDYLDVSKLNGGEVNET
******.*******:*******************************