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Pangenome04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS00480 [old locus tag: SA0067 ]
  • pan locus tag?: SAUPAN000455000
  • symbol: SA_RS00480
  • pan gene symbol?: kdpD
  • synonym:
  • product: sensor histidine kinase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS, pseudogene
  • locus tag: SA_RS00480 [old locus tag: SA0067 ]
  • symbol: SA_RS00480
  • product: sensor histidine kinase
  • replicon: chromosome
  • strand: -
  • coordinates: 74179..76848
  • length: 2670
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002745 (74179..76848) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    ATGGAAAGTACATAAAAAAAAAGAGGGAAACTTACCATTTATTTAGGCTATAGCCCAGGG
    GTAGGTAAAACGTATGAAATGTTATCAAATGGTATTGATCAGTATCAAGAAGGTGCAGAT
    ATTAAAATTGGTTATATCGAACCCCATCAACGCCCTGAAACCAATGCACTGGTTCAACAA
    TTGCCTGAAATTTCGACCTCCAGCCGTAAATTTGGCAGCCACACCTTTCACTATATAGAT
    GTCTCTAAAATCATAGAAGCTAATCCAGATGTGGTCTTAATTGATGAACTAGCACATACA
    AACATTTCAAAAGAGCGCCATTTAAAACGTTATAAGGATATAGAAGAAATTCTATCGCAT
    GGTATCGATGTCTGGACAACACTCAACATCCAACATATCGAGAGTCTAAGCGGACAAATT
    GCGTTAATGACAGGTATTCAAGTTACAGAACGTGTGCCCGACCAATTCATTACGTCAGCA
    GATGCCTTTGAAGTTGTGGATATTTCACCAAATATGTTGATTCAGCGCCTTAAAGCAGGA
    AAAGTATATAAAAAAGAACGCTTAGAAACAGCCTTTTCTAATTTCTTTACGTATGAAAAT
    CTGACAGAGCTGCGTGAACTTACACTCAGAACTGTCGCAGATATTATGAGTCAAAAAGGA
    CAACAATATAAAACTAAACATACCGACATTACACCGCATATTGCGGTAGCTATCAGCGGC
    AGTATTTATAACGAACGGGTCATACGAGAAGCAAGACGTGCTGCCTATAAAGAACATGCT
    AAATTCACAGCTGTGTATATTGATGTCTTTGAGACACCGTCAGAAAGCAGAAAACAAGAT
    CATTATGTCCATAAAAATCTAATGCTCGCCAAAGCGTTAGGTGCAGAAATCAAAGTGTTG
    TATGCACAAGATATTGCGAAAGCGTTAACCGATTGGTGTGATCTCGCTTTTGTGACGAAG
    CTAGTCCTTGGACAGTCAGAACAGCCACGTTGGAAAGATTACTTTAAACAGTCACTCATT
    GAACAAATTAATCACGTACCACACCATTTCAAGTTAGAAATTGTACCGATTCATTATATT
    CATTCAGACAAACCTACAAATACACCTAAGCAAGCTCAAAAATCCTCTCGTTTAACTGTA
    GAGATTATGAAGATGCTTGTAATTCAAACGATCTGTGTCTTGCTCGGTATATGGGTTTAC
    AACTTAGATAAAAGCGAATCCAGTGCCATTATCTTGCTGATGTTCTTTATCGGTATTATC
    GTGCTTTCTATTTGGACCCAATCCTATTTAATCGGATTCTTTGCGTCTATCTTAAATGTG
    TTTGTTTTTAATTATTTCTTTACGGTGCCAAGATTCACTTTAGAAATGTATCGCTTTGAA
    TATCCGATTACGTTTGCGACCAGTATTTTTGCTAGTATCTTTACGAGTGCCATCTTAAAG
    AATTTAAAACATCAGCATTCCTTAACAGAACGGCAGTTATATCGGACCAATATTATGCTG
    CAATTTAACCAGTCCATTAAAGAATCTTATTCAATTGAACGCTTATTAAATATTGCTGGT
    GATCAGATTCATCAGCTACTCAATCAGGATGTCACGGTATTCTTAATTCAAAGTAAGAAA
    GTCGCTGCTTCCAACTCATTTGGAAACAGAAGCATTTCAAGCTCAGATAAGACACATGAT
    GCTGAGACATTGAGCTGGGTCATTGAAAATGAAAGCCGTGCCGGTAAATTAACCGATACC
    TTTCCTGGCAGTAAATTTTTGTGTATTCCCATTGGCACAAATCCAGTCAAAGGTGTGATT
    TCTATCCGCTTCACCGACGAAACTTACATCGACACCTATGACAATTCAATATTAGACTCT
    ATGTTGAACGATATTACCCTGGCAATAGAGAATGTGGATCTATTAAAACAAACCAGACAA
    TCCATATTGAAAGCTGAACGAGAAGCCACACGTTCAAACTTCTTGCATTCAATTTCACAT
    GATATTAGAACACCACTGACTTCCATTATGGGCAACTTAGATATGCTGAAATACCATAAC
    GAGCATTTAAACGATCAACAACAAGCAGAACTCTTAACTGCTTCTTATGGCGAAGCACAA
    TATCTGCATACCTTAGTCACAAATATTTTATCTTTGACTAAGTTAGAAAGCTCTGACATT
    CAAATACAACGCACCCCTTATTTAGTAGAAGAACTTCTAGAAGAATTTGAAGAAGGCCTC
    ATACGCAGACACCAAGCAAATCATGTCATTATTGAAAATGAGGATGACGCTTCACTCATT
    AATATCGACAGTAAATTAATACTGCAAGTGCTATTCAACCTTATCGATAATGCTTTAAAG
    CATGCAGAATCACATTCTGAAATAAAACTGCACGTTCAACATGAAACAAACAAAATAAAA
    TTCGAAATGATAGATTGCGGAAAAGGTATTCCAGAAGAAGAACGTCAATTGATTTTTAAT
    CCCTATTATTCAGGAGACAACTTTAAAGACAATAAAAAAGATAGTTTGGGATTAGGGCTC
    TATTTAGTACAACTCATCTTGAAACAACACAACAGTGAATTAGAATATCAACCGAATACA
    CCACAAGGCAGTATTTTTTATTTTTATTTGACTGTTAATCCAATTGAAATGGAGGGAGCC
    ATGGATGAAAACAACATTATTGGTCGTTGA
    60
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    2160
    2220
    2280
    2340
    2400
    2460
    2520
    2580
    2640
    2670

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA_RS00480 [old locus tag: SA0067 ]
  • symbol: SA_RS00480
  • description: sensor histidine kinase
  • length: 0
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

Accession numbers[edit source | edit]

  • GI:
  • RefSeq:
  • UniProt:

Protein sequence[edit source | edit]

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SA_RS00480 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]