NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA_RS10080
• pan locus tag^?:
• symbol: SA_RS10080
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SA_RS10080
• symbol: SA_RS10080
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 2006215..2006475
• length: 261
• essential: unknown

⊟Accession numbers

• Location: NC_002745 (2006215..2006475) NCBI
• BioCyc: G1G21-2033 BioCyc
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  
  GTGTGTATTGTTATTTACCTAATTTATAGTCTAATTGTCTATTTCATCTGCATTATAAAT
  TTTTTCATAATGGCTGCACCATTCTTAATGACTAATGCTGATTATGTATGGACGCCTATG
  ACTACAGTTACGTTATTTATTTTGAGTTTGATTATTTTCTTGATATTTATAAAAACAAAA
  GATGTCGTTCATTTAACAATTTTCATATTAAACTTACTTTTTTCAATACTTTATTGTTTG
  CCTATACTGTTTTATTTATGA
  60
  120
  180
  240
  261
  

⊟Protein

⊟General

• locus tag: SA_RS10080
• symbol: SA_RS10080
• description: hypothetical protein
• length: 86
• theoretical pI: 7.17012
• theoretical MW: 10144.6
• GRAVY: 1.83605

⊟Function

• TIGRFAM:
• TheSEED:
• PFAM:

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: Cytoplasmic Membrane
  • Cytoplasmic Score: 0
  • Cytoplasmic Membrane Score: 10
  • Cellwall Score: 0
  • Extracellular Score: 0
  • Internal Helices: 3
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.155
  • Ymax_pos: 26
  • Cmax: 0.169
  • Cmax_pos: 26
  • Smax: 0.227
  • Smax_pos: 24
  • Smean: 0.11
  • D: 0.137
• predicted transmembrane helices (TMHMM): 3

⊟Accession numbers

• GI:
• RefSeq: WP_001791826 NCBI
• UniProt:

⊟Protein sequence

• MCIVIYLIYSLIVYFICIINFFIMAAPFLMTNADYVWTPMTTVTLFILSLIIFLIFIKTKDVVHLTIFILNLLFSILYCLPILFYL

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• SA_RS10080 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

You are kindly invited to share additional interesting facts.