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NCBI: 01-DEC-2025

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus JSNZ
  • locus tag: EGJ38_000684 [new locus tag: EGJ38_RS03415 ]
  • pan locus tag?: SAUPAN002602000
  • symbol: EGJ38_000684
  • pan gene symbol?: —
  • synonym:
  • alternate name: JSNZ_000684
  • product: hypothetical protein

⊟Additional information (user-provided)[edit | edit source]

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: EGJ38_000684 [new locus tag: EGJ38_RS03415 ]
  • symbol: EGJ38_000684
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 716307..716513
  • length: 207
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Gene ID:
  • RefSeq: MGT2422661 NCBI
  • BioCyc:
  • MicrobesOnline:

⊟Phenotype[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    ATGATTATTGTTTATATTGTGCTGTTGTTAATTCTTGTATACGTAAATTATCGATTAGTG
    AATCGATTGCTATCTGAAAATAGAATATATGTTGTTCGTTTGATAGCAACAATTACTACT
    GTTATAAGCTTTATCCTTGTATACGCATTAATTCACGAACTCATGCCTTTTGTTGTGCGG
    GCAATGGATTTAATGTATCACCAGTAA
    60
    120
    180
    207


⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: EGJ38_000684 [new locus tag: EGJ38_RS03415 ]
  • symbol: EGJ38_000684
  • description: hypothetical protein
  • length: 68
  • theoretical pI: 9.46024
  • theoretical MW: 8082.92
  • GRAVY: 1.30735

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: data available for N315, NCTC8325
  • PFAM:
    GT-C (CL0111) PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase (PF13231; HMM-score: 10)
    Peptidase_MA (CL0126) Peptidase_M56; BlaR1 peptidase M56 (PF05569; HMM-score: 9.8)
    CPA_AT (CL0064) DUF819; Protein of unknown function (DUF819) (PF05684; HMM-score: 9.3)
    and 1 more
    no clan defined DUF4750; Domain of unknown function (DUF4750) (PF15938; HMM-score: 6.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 2
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9994
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0005
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.00324
    • TAT(Tat/SPI): 0.000079
    • LIPO(Sec/SPII): 0.002288
  • predicted transmembrane helices (TMHMM): 2

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: MGT2422661 NCBI
  • UniProt:

⊟Additional information (user-provided)[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MIIVYIVLLLILVYVNYRLVNRLLSENRIYVVRLIATITTVISFILVYALIHELMPFVVRAMDLMYHQ

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Additional information (user-provided)[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Other information (user-provided)[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]


⊟Relevant publications[edit | edit source]

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