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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_0264 [new locus tag: NWMN_RS01460 ]
- pan locus tag?: SAUPAN000543000
- symbol: NWMN_0264
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_0264 [new locus tag: NWMN_RS01460 ]
- symbol: NWMN_0264
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 322321..323253
- length: 933
- essential: unknown
⊟Accession numbers[edit | edit source]
- Gene ID: 5332045 NCBI
- RefSeq: YP_001331298 NCBI
- BioCyc:
- MicrobesOnline: 3705795 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901ATGGAAGAGAATAAAACTTTAAAAGAATACTTGCGTAAATTTTTAGAAGGCTACAAATAT
GTAGTTGAAAACAGATACAATTATCAGTTTAGTAGCAATCCAGAAGCTTTCCCATTCATG
AGAAAAGACGATTACAAGATTTCGATATTTTATCTAAATCAATCTTTTTTTGAAGAACCT
TGCATCGTCGTTATCTCAAATGACAGTAAATTAAAAGAAATATATAATTTTCGTAATATT
GATATCAAATATTTGTCTAAACACTTTACTTCATACATATATGATTCTAAAAAGTATGTA
GAAGAACAATCCGGATTATTAGATTTTAATAATTACATTTATTACACATCTATTTACTAC
GGAAAATATATCGGGACCGTAATATTACAAAACAATTTAGATTTATTTTTTAATTATGGC
AAAAGATTAGCTAACGATCATTACAATACATTGATATCGAAGTCGAAAGAAAGATTGATA
AACAAAGCACATGATGAAATACAACCGTTCAACCACTTAGATTTAAATAGTATGAAAGAG
ATTGTTGATGATATAACTTTTTCTTATCAAATAGAACAAGGATTACAAGCTTATAAAAGG
GAATTGTATTTGCCAGCTGCAGCAACCTTTGCTGTTGCTATAGAAACGTTTTTAATCAAA
TTAAAAAAAGTTAATAAAATCAAACATAAAGACACCGATTCAACTATGTACACAAAATTA
TTAGGAGAATTAACTAAAGAAGGTAAAGTAAATTATAGAACCAAAAAACGGGTAGAAATT
GCGTATAGTATGAGAAACATAATCAACCATTCACAAGCTGGTGCAGTAGCCAAAGGTGAT
TGTGACTTTCTTTTAAACACACTAAAAGACATTGTTGATGAAAACGAAAAAATATTAAGA
GAATATACCAAATCAATTAATAAGACGGAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_0264 [new locus tag: NWMN_RS01460 ]
- symbol: NWMN_0264
- description: hypothetical protein
- length: 310
- theoretical pI: 8.88086
- theoretical MW: 36755.6
- GRAVY: -0.57
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 0.83
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.00531
- TAT(Tat/SPI): 0.0004
- LIPO(Sec/SPII): 0.000649
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MEENKTLKEYLRKFLEGYKYVVENRYNYQFSSNPEAFPFMRKDDYKISIFYLNQSFFEEPCIVVISNDSKLKEIYNFRNIDIKYLSKHFTSYIYDSKKYVEEQSGLLDFNNYIYYTSIYYGKYIGTVILQNNLDLFFNYGKRLANDHYNTLISKSKERLINKAHDEIQPFNHLDLNSMKEIVDDITFSYQIEQGLQAYKRELYLPAAATFAVAIETFLIKLKKVNKIKHKDTDSTMYTKLLGELTKEGKVNYRTKKRVEIAYSMRNIINHSQAGAVAKGDCDFLLNTLKDIVDENEKILREYTKSINKTE
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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