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NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_0382 [new locus tag: NWMN_RS02160 ]
- pan locus tag?: SAUPAN002055000
- symbol: NWMN_0382
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_0382 [new locus tag: NWMN_RS02160 ]
- symbol: NWMN_0382
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 431096..431632
- length: 537
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 5331980 NCBI
- RefSeq: YP_001331416 NCBI
- BioCyc:
- MicrobesOnline: 3705913 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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481ATGCACAACAATAATGAATTCAACAAAAAACTGAAAGATTTTATAGGTAGCGATAAACGG
ATGGCTTTAGTAAAGGGTTATGTTAACGAGTATAAATTAACAACTGTTTTAAGAGCTTTA
AATAATTCCGATTACACAAAAGGGACGATACACACTCGTTCAATAGGCAACCTAAAACAA
ATAGTAGATAATCGAATTATTCCTAAAAATATAACTCAAAACACAATCTTCAAATTGAGT
AATTTAACCTTAGAGGTTAACCTCTATGAAAGAAACACAATTTATCACGGAGACTTTGCT
ATTTACTATCCTGTAGAATCTGCTCTAATAATAGAAACAGATACTCCTAGGCTAATTAAT
CATATAAATAACAACCCAGTCCAAAAAATATTTATAATAACAACAAATGACTGGAGCTTT
AATACACTTGAATTAGAAAAAATAGTAGACGAAACTATAATTTATGATTTAAAACAAGAA
GATCCTAAACAATATGAAATTTTATATAAAAATAAACACGGAAAATTGCCTTATTGA60
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537
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_0382 [new locus tag: NWMN_RS02160 ]
- symbol: NWMN_0382
- description: hypothetical protein
- length: 178
- theoretical pI: 9.07462
- theoretical MW: 20895.7
- GRAVY: -0.538202
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.015199
- TAT(Tat/SPI): 0.001445
- LIPO(Sec/SPII): 0.002577
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MHNNNEFNKKLKDFIGSDKRMALVKGYVNEYKLTTVLRALNNSDYTKGTIHTRSIGNLKQIVDNRIIPKNITQNTIFKLSNLTLEVNLYERNTIYHGDFAIYYPVESALIIETDTPRLINHINNNPVQKIFIITTNDWSFNTLELEKIVDETIIYDLKQEDPKQYEILYKNKHGKLPY
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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