PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002055000
• symbol^?: —
• synonym:
• description^?: hypothetical protein
• strand^?: -
• coordinates^?: 2537878..2538418
• synteny block^?: BlockID0013770
• occurrence^?: in 76% of 33 strains

⊟Orthologs

COL:
SACOL0462
N315:
SA0377
NCTC8325:
SAOUHSC_00376
Newman:
NWMN_0382
USA300_FPR3757:
SAUSA300_0390
04-02981:
SA2981_0390
08BA02176:
C248_0465
11819-97:
—
6850:
—
71193:
ST398NM01_0484
ECT-R 2:
ECTR2_351
ED133:
SAOV_0432c
ED98:
SAAV_0359
HO 5096 0412:
—
JH1:
SaurJH1_0450
JH9:
SaurJH9_0439
JKD6008:
SAA6008_00416
JKD6159:
SAA6159_00366
LGA251:
SARLGA251_03520
M013:
—
MRSA252:
SAR0411
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_0413
Mu50:
SAV0416
MW2:
—
RF122:
—
ST398:
SAPIG0484
T0131:
SAT0131_00451
TCH60:
HMPREF0772_10102
TW20:
SATW20_04890
USA300_TCH1516:
USA300HOU_0415
VC40:
SAVC_01710

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MHNNNEFNKKLKDFIGSDKRMALVKGYVNEYKLTTVLRALNNSDYTKGTIHTRSIGNLKQ
  N315            MHNKNEFNKKLKDFIGSDKRMALVKGYINEYKLTTVLRALNNSDYTKGTIHTRSIGNLKQ
  NCTC8325        MHNNNEFNKKLKDFIGSDKRMALVKGYVNEYKLTTVLRALNNSDYTKGTIHTRSIGNLKQ
  Newman          MHNNNEFNKKLKDFIGSDKRMALVKGYVNEYKLTTVLRALNNSDYTKGTIHTRSIGNLKQ
  USA300_FPR3757  MHNNNEFNKKLKDFIGSDKRMALVKGYVNEYKLTTVLRALNNSDYTKGTIHTRSIGNLKQ
                  ***:***********************:********************************
  
  COL             IVDNRIIPKNITQNTIFKLSNLTLEVNLYERNTIYHGDFAIYYPVESALIIETDTPRLIN
  N315            IVDNRIIPKNITQNKIFKLSNLTLEVNLYERNTIYHGDFAIYYPVESALIIETDTPRLIN
  NCTC8325        IVDNRIIPKNITQNTIFKLSNLTLEVNLYERNTIYHGDFAIYYPVESALIIETDTPRLIN
  Newman          IVDNRIIPKNITQNTIFKLSNLTLEVNLYERNTIYHGDFAIYYPVESALIIETDTPRLIN
  USA300_FPR3757  IVDNRIIPKNITQNTIFKLSNLTLEVNLYERNTIYHGDFAIYYPVESALIIETDTPRLIN
                  **************.*********************************************
  
  COL             HINNNPVQKIFIITTNDWSFNTLELEKIVDETIIYDLKQEDPKQYEILYKNKHGKLPY
  N315            HINNNPVQKIFIITTNDWSFNTLELEKIVDETIIYDLKQEDPKQYEILYKNKHGKLPY
  NCTC8325        HINNNPVQKIFIITTNDWSFNTLELEKIVDETIIYDLKQEDPKQYEILYKNKHGKLPY
  Newman          HINNNPVQKIFIITTNDWSFNTLELEKIVDETIIYDLKQEDPKQYEILYKNKHGKLPY
  USA300_FPR3757  HINNNPVQKIFIITTNDWSFNTLELEKIVDETIIYDLKQEDPKQYEILYKNKHGKLPY
                  **********************************************************