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NCBI: 06-JUL-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_0659 [new locus tag: NWMN_RS03735 ]
  • pan locus tag?: SAUPAN002574000
  • symbol: NWMN_0659
  • pan gene symbol?: —
  • synonym:
  • product: anion transporter family protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_0659 [new locus tag: NWMN_RS03735 ]
  • symbol: NWMN_0659
  • product: anion transporter family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 739969..741522
  • length: 1554
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGTCAGAAGAAAAACATGTAGTTGAACATGAACAACAAAAGAAAGAAAAGACAAAAAAG
    CAATACAAGCCATTTTGGATTGTCATGAGTTTTATAATACTTATAGTTGTACTATTACTC
    CCGGCACCTTCAAGTCTGCCGATAATGGCTAAGGCAGTACTAGCTATTTTAGCTTTTGCA
    GTTATTATGTGGGTAACGGAAGCTGTATCATATCCGGTGTCAGCAACTTTAATTATTGGC
    TTAATGATATTACTTTTAGGATTTAGCCCTGTTCAAAATTTAGGGGAGAAGCTAGGTAAT
    CCGAAAAGTGGCAGTGCTATTTTAGCTGGAAGTGACCTTCTAGGAACTAATCATGCATTA
    TCATTAGCGTTTAGTGGATTTGCAACTTCAGCTGTAGCTCTCGTTGCAGCTGCATTATTT
    TTGGCTGCTGCTATGCAAGAAACGAATTTGCATAAAAGACTAGCTCTTTTAGTGTTATCA
    ATTGTTGGTAATAAAACTAGAAATATAGTTATTGGAGCAATTATCGTTTCAATTGTACTT
    GCATTTTTCGTTCCTTCTGCAACAGCTAGAGCAGGGGCAGTTGTACCAATCTTGCTGGGT
    ATGATTGCGGCATTTAAAGTTTCCAAAGATAGCAAGTTAGCGTCTTTATTAATAATTACT
    TCAGTACAAGCTGTGTCAATTTGGAATATTGGTATCAAAACGGCGGCAGCACAAAATATC
    GTAGCGATTAATTTTATAAACCATCAATTAGGATTTGATGTTTCATGGGGCGAGTGGTTC
    TTATATGCAGCGCCTTGGTCCATAGTTATGTCCGTAGCTTTATATTTCATCATGATTAAA
    GTGATGCCTCCAGAAATTAATACAATAGAAGGTGGTAAAGATTTAATAAAAGAAGAATTG
    CATAAACTTGGCCCCGTTAGCCCACGTGAATGGCGTTTAATTGTTATATCGATGTTATTA
    TTACTGTTTTGGTCAACTGAAAAAGTATTACATCCGATTGACTCTGCATCCATTACTATT
    ATTGCTTTAGGTGTTATGTTAATGCCGAAAATTGGTGTCATGACATGGAAACATGTTGAA
    AATAAAATACCATGGGGAACAATTATCGTGTTTGGTGTAGGTATTTCACTAGGTAACGTT
    CTTTTGAAAACAGGTGCAGCTCAATGGTTAAGTGATCAAACTTTTGGTGTTTTAGGTTTA
    AAACATTTACCTATTATCGCGACAATTGCACTTATCACGCTTTTTAATATATTGATTCAT
    TTGGGCTTTGCGAGTGCAACAAGTTTATCATCAGCGTTAATACCTGTTTTTATTTCGCTA
    ACCTCTACGTTACACTTAGGAGACCAGTCTATAGGATTTGTTTTAATTCAACAATTTGTT
    ATTAGTTTTGGTTTCTTATTACCTGTTAGTGCACCTCAAAATATGTTGGCTTATGGCACT
    GGTACTTTTACGGTTAAAGATTTCTTGAAGGCAGGTATACCATTGACAATTGTAGGGTAT
    ATTCTAGTGATAGTTTTTAGCATGACTTATTGGAAATGGTTAGGTTTGCTTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1554

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_0659 [new locus tag: NWMN_RS03735 ]
  • symbol: NWMN_0659
  • description: anion transporter family protein
  • length: 517
  • theoretical pI: 10.1501
  • theoretical MW: 55863.7
  • GRAVY: 0.889168

⊟Function[edit | edit source]

  • ⊞TIGRFAM:
    Metabolism Transport and binding proteins Cations and iron carrying compounds transporter, divalent anion:Na+ symporter (DASS) family (TIGR00785; HMM-score: 257.2)
    Metabolism Transport and binding proteins Anions transporter, divalent anion:Na+ symporter (DASS) family (TIGR00785; HMM-score: 257.2)
    and 1 more
    TIGR03943 family protein (TIGR03943; HMM-score: 5.6)
  • TheSEED  :
    • Sodium/di- and tricarboxylate cotransporter
  • ⊞PFAM:
    IT (CL0182) Na_sulph_symp; Sodium:sulfate symporter transmembrane region (PF00939; HMM-score: 369.6)
    and 1 more
    CitMHS; Citrate transporter (PF03600; HMM-score: 83.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 11
  • ⊞DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 1
    • Cell wall & surface Score: 0
    • Extracellular Score: 0
  • ⊞LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: 0.17
    • Signal peptide possibility: 0
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.015225
    • TAT(Tat/SPI): 0.000673
    • LIPO(Sec/SPII): 0.00453
  • predicted transmembrane helices (TMHMM): 12

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSEEKHVVEHEQQKKEKTKKQYKPFWIVMSFIILIVVLLLPAPSSLPIMAKAVLAILAFAVIMWVTEAVSYPVSATLIIGLMILLLGFSPVQNLGEKLGNPKSGSAILAGSDLLGTNHALSLAFSGFATSAVALVAAALFLAAAMQETNLHKRLALLVLSIVGNKTRNIVIGAIIVSIVLAFFVPSATARAGAVVPILLGMIAAFKVSKDSKLASLLIITSVQAVSIWNIGIKTAAAQNIVAINFINHQLGFDVSWGEWFLYAAPWSIVMSVALYFIMIKVMPPEINTIEGGKDLIKEELHKLGPVSPREWRLIVISMLLLLFWSTEKVLHPIDSASITIIALGVMLMPKIGVMTWKHVENKIPWGTIIVFGVGISLGNVLLKTGAAQWLSDQTFGVLGLKHLPIIATIALITLFNILIHLGFASATSLSSALIPVFISLTSTLHLGDQSIGFVLIQQFVISFGFLLPVSAPQNMLAYGTGTFTVKDFLKAGIPLTIVGYILVIVFSMTYWKWLGLL

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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