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NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_0753 [new locus tag: NWMN_RS04260 ]
- pan locus tag?: SAUPAN002772000
- symbol: NWMN_0753
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_0753 [new locus tag: NWMN_RS04260 ]
- symbol: NWMN_0753
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 846977..847705
- length: 729
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 5330435 NCBI
- RefSeq: YP_001331787 NCBI
- BioCyc:
- MicrobesOnline: 3706302 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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721ATGAAAAAAGTAATGGGGATATTATTAGCAAGTACACTTATCTTAGGTGCTTGTGGACAT
CATCAAGATAGTGCAAAAAAAGAGAGCACTAGTCACAAAAAGAAAGAAAATGACAATGAA
GAATTAAATGAAGAACTTAAAGAATTTAAAAGCAAAAAAAATATGGATATAAAAATTAAA
GGCGATACTATTGTTAGTGACAAATTTGAAGCTAAAATAAAAGAACCGTTTATCATCAAT
GAAAAAGATGAGAAAAAGAAATATATCGCTTTTAAAATGGAAATTACTGCTAAAAAAGAC
GATAAAGATTTAAATCCATCTTCTATTTCTCATGACTATATTAATATCACTCAAGATGAT
AAAAATACAGTAAATAAATTAAGAGATGGTTATCTTTTAAGTGATAAAAAATATAAAGAT
TGGACAGAACATAACCAAGATCAAATTAAAAAAGGCAAAACTGCACAAGCCATGTTTATC
TATGAGTTAAGAGGTGATGGAAATATTAATTTAAATGTCCATAAATACTCAGAAGATAAA
ACAGTTGATTCTAAATCATTCAAATTTAGTAAACTTAAAACCGAAGATTTTTCTCATAGA
GCGGAAACAAGAGAAGAAGTAGAAAAGAAAGAAAAAGAATTTGAAGAAGAGTACAAAAAA
GAACAAGAACGAGAGAAAGAAAAAGAAAAGCAAAAAGATGACGACCACAGTGGTTTAGAT
GAAGTATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_0753 [new locus tag: NWMN_RS04260 ]
- symbol: NWMN_0753
- description: hypothetical protein
- length: 242
- theoretical pI: 6.73788
- theoretical MW: 28418.7
- GRAVY: -1.33554
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- PFAM: MPT63-MPB63 (CL0524) DUF5067; Domain of unknown function (DUF5067) (PF16729; HMM-score: 72.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 4.6
- Cellwall Score: 2.48
- Extracellular Score: 2.92
- Internal Helices: 0
- LocateP: Lipid anchored
- Prediction by SwissProt Classification: Extracellular
- Pathway Prediction: Sec-(SPII)
- Intracellular possibility: -0.33
- Signal peptide possibility: 1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: ILGACGH
- SignalP: Signal peptide LIPO(Sec/SPII) length 17 aa
- SP(Sec/SPI): 0.000938
- TAT(Tat/SPI): 0.000074
- LIPO(Sec/SPII): 0.998709
- Cleavage Site: CS pos: 17-18. LGA-CG. Pr: 0.9992
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKKVMGILLASTLILGACGHHQDSAKKESTSHKKKENDNEELNEELKEFKSKKNMDIKIKGDTIVSDKFEAKIKEPFIINEKDEKKKYIAFKMEITAKKDDKDLNPSSISHDYINITQDDKNTVNKLRDGYLLSDKKYKDWTEHNQDQIKKGKTAQAMFIYELRGDGNINLNVHKYSEDKTVDSKSFKFSKLKTEDFSHRAETREEVEKKEKEFEEEYKKEQEREKEKEKQKDDDHSGLDEV
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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