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NCBI: 06-JUL-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_1213 [new locus tag: NWMN_RS06820 ]
  • pan locus tag?: SAUPAN003622000
  • symbol: NWMN_1213
  • pan gene symbol?: bsaA
  • synonym:
  • product: glutathione peroxidase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_1213 [new locus tag: NWMN_RS06820 ]
  • symbol: NWMN_1213
  • product: glutathione peroxidase
  • replicon: chromosome
  • strand: -
  • coordinates: 1339051..1339527
  • length: 477
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGGAGACAATTTATGATTTTGTAGTAGAAACAAATAAAGGTGTTACTTACAAATTAGAT
    GCATATAAGGGTGACGTTATGCTAATTGTTAATACAGCTAGCGAATGTGGCTTTACTTCA
    CAATTTGAAGGTTTGCAATCATTATACGAGAAATACAAAGATCAAGGGTTTGTAATTCTA
    GGTTTCCCTTGTAATCAATTTGGTGGCCAAGAACCTGGTTCAGGCGAAGAAGCAGCTCAA
    AACTGTAAATTAAACTATGGTGTTACCTTCCCTATGCATCAAAAAATAGACGTAAAAGGG
    GAACATCAATTACCTTTATTTAGATATTTGACTGCGGCACAACACGGATTCTTTAATGAG
    AAAATCAAATGGAATTTCACTAAGTTTTTAGTGGATCGCGAAGGTAACGTTGTTAAACGA
    TTTGCACCTCAAAAAAAACCTGTTCAAATCGAAAGAGAAATAGAAAAATTATTATAA
    60
    120
    180
    240
    300
    360
    420
    477

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_1213 [new locus tag: NWMN_RS06820 ]
  • symbol: NWMN_1213
  • description: glutathione peroxidase
  • length: 158
  • theoretical pI: 6.77696
  • theoretical MW: 18117.6
  • GRAVY: -0.423418

⊟Function[edit | edit source]

  • TIGRFAM:
    putative glutathione peroxidase Gpx7 (TIGR02540; EC 1.11.1.9; HMM-score: 131.3)
  • TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
  • PFAM:
    Thioredoxin (CL0172) GSHPx; Glutathione peroxidase (PF00255; HMM-score: 131.5)
    and 2 more
    AhpC-TSA; AhpC/TSA family (PF00578; HMM-score: 25.7)
    Redoxin; Redoxin (PF08534; HMM-score: 19.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.047312
    • TAT(Tat/SPI): 0.000368
    • LIPO(Sec/SPII): 0.004337
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • METIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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