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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_1676
- pan locus tag?: SAUPAN004486000
- symbol: NWMN_1676
- pan gene symbol?: —
- synonym:
- product: putative transposase for IS1272
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_1676
- symbol: NWMN_1676
- product: putative transposase for IS1272
- replicon: chromosome
- strand: +
- coordinates: 1870802..1871626
- length: 825
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 5330993 NCBI
- RefSeq: YP_001332710 NCBI
- BioCyc:
- MicrobesOnline: 3707228 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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781ATGATGTTAAAAATCATCTTATATGCATATACTCAATCTGTATTTTCTGGTCGAAGAATA
GAGAAATTACTTCATGACAGTATTCGAATGATGTGGTTAGCTCAAAATCAAACACCTTCT
TATAAAACTATTAATCGTTTTAGAGTGAATCCTAATACTGATGCGTTAATTGAATCTTTA
TTTATTCAGTTCCATAGTCAATGTTTAAAGCAAAATCTTATTGATAATAATTCAATTTTT
ATTGATGGTACAAAAGTAGAAGCTAATGCCAATAGATATACATTTGTGTGGAAGAAAAGT
ATTCAAAATCACGAATCGAAATTGAACGAAAATTCAAAAGCATTATATCGTGACTTAGTT
GAAGAAAAAATAATACCAGAGATAAAAGAAGATGGAGATAGCGATTTAACAATAGAAGAA
ATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATTCTATTGAG
AACGAAGATTGTGCTCAAATTAGAAAACAGACCCGTAAAAAAAGAACTGAGATTAAGAAG
TTCAAAAAGAAATTTGATGATTATTCCGAAAGAAAAAATAAATATGAAGAACAAAAATCG
ATTCTTAAAGATAGAAATAGTTTTTCTAAAACTGATCATGATGCAACTTTTATGAGAATG
AAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAATAGCGACA
AATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCGACAGATACTAGAACTTTA
ATTCCATTTTTAACAATGATTCAAAATACCTTCGGTTATTTGTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_1676
- symbol: NWMN_1676
- description: putative transposase for IS1272
- length: 274
- theoretical pI: 8.5855
- theoretical MW: 32410.6
- GRAVY: -0.767883
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MMLKIILYAYTQSVFSGRRIEKLLHDSIRMMWLAQNQTPSYKTINRFRVNPNTDALIESLFIQFHSQCLKQNLIDNNSIFIDGTKVEANANRYTFVWKKSIQNHESKLNENSKALYRDLVEEKIIPEIKEDGDSDLTIEEIDLIGSHLDKEIEDLNHSIENEDCAQIRKQTRKKRTEIKKFKKKFDDYSERKNKYEEQKSILKDRNSFSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYDLFQNPTDTRTLIPFLTMIQNTFGYL
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available