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NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_1902 [new locus tag: NWMN_RS10940 ]
- pan locus tag?: SAUPAN001380000
- symbol: NWMN_1902
- pan gene symbol?: —
- synonym:
- product: phage transcriptional activator
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_1902 [new locus tag: NWMN_RS10940 ]
- symbol: NWMN_1902
- product: phage transcriptional activator
- replicon: chromosome
- strand: -
- coordinates: 2115149..2115565
- length: 417
- essential: unknown
⊟Accession numbers[edit | edit source]
- Gene ID: 5331166 NCBI
- RefSeq: YP_001332936 NCBI
- BioCyc:
- MicrobesOnline: 3707490 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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361ATGATAAAGATTGAGAAACACGATATCAAAAAGCTTGAAGAATACATTCAGCACATCGAT
AACTATCGAAGAGAGTTGAAGATGCGAGAATATGAATTACTTGAAAGTCATGAACCAGAT
AATGCGGGAGCTGGCAAAAGTAATTTGCCGGGTAACCCGATTGAACGATGTGCAATAAAG
AAGTTTAGTGATAACAGGTACAATACATTAAGAAATATAGTTAACGGTGTAGATAGATTG
ATAGATGAAAGTGATGAGGATACGCTTGAGTTATTAAGGTTTAGATATTGGGATTGTCCT
ATTGGTTGTTATGAATGGGAAGATATAGCACATTACTTTGGTACAAGTAAGACAAGTATA
TTACGTAGAAGGAATGCACTGATCGATAAGTTAGCAAAGTATATTGGTTATGTGTAG60
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417
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_1902 [new locus tag: NWMN_RS10940 ]
- symbol: NWMN_1902
- description: phage transcriptional activator
- length: 138
- theoretical pI: 6.51696
- theoretical MW: 16427.5
- GRAVY: -0.775362
⊟Function[edit | edit source]
- TIGRFAM: Mobile and extrachromosomal element functions Prophage functions phage transcriptional regulator, RinA family (TIGR01636; HMM-score: 47)Regulatory functions DNA interactions phage transcriptional regulator, RinA family (TIGR01636; HMM-score: 47)
- TheSEED: data available for USA300_FPR3757
- PFAM: no clan defined ADIP; Afadin- and alpha -actinin-Binding (PF11559; HMM-score: 13.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MIKIEKHDIKKLEEYIQHIDNYRRELKMREYELLESHEPDNAGAGKSNLPGNPIERCAIKKFSDNRYNTLRNIVNGVDRLIDESDEDTLELLRFRYWDCPIGCYEWEDIAHYFGTSKTSILRRRNALIDKLAKYIGYV
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available