Jump to navigation
Jump to search
NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_2043 [new locus tag: NWMN_RS11800 ]
- pan locus tag?: SAUPAN005436000
- symbol: NWMN_2043
- pan gene symbol?: dps
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_2043 [new locus tag: NWMN_RS11800 ]
- symbol: NWMN_2043
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2260655..2261098
- length: 444
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 5331859 NCBI
- RefSeq: YP_001333077 NCBI
- BioCyc:
- MicrobesOnline: 3707636 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421ATGAGTAATCAACAAGATGTTGTAAAAGAATTGAATCAACAAGTAGCAAACTGGACAGTA
GCTTACACAAAGCTACACAATTTCCACTGGTATGTGAAAGGGCCTAACTTCTTCTCATTA
CACGTTAAATTTGAAGAATTATATAATGAAGCAAGCCAATATGTAGACGAATTAGCTGAA
AGAATTTTAGCGGTAGGAGGAAACCCTGTAGGTACATTAACTGAATGCTTAGAGCAATCA
ATTGTTAAAGAAGCTGCGAAAGGTTACTCTGCAGAACAAATGGTTGAAGAATTATCACAA
GACTTCACAAATATCTCAAAACAATTAGAAAACGCAATCGAAATTGCTGGTAATGCTGGC
GATGATGTATCAGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGG
ATGTTTAAATCTTACTTAAGCTAA60
120
180
240
300
360
420
444
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_2043 [new locus tag: NWMN_RS11800 ]
- symbol: NWMN_2043
- description: hypothetical protein
- length: 147
- theoretical pI: 4.29468
- theoretical MW: 16691.5
- GRAVY: -0.394558
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Cations and iron carrying compounds bacterioferritin (TIGR00754; HMM-score: 17.9)
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- ⊞PFAM: Ferritin (CL0044) Ferritin; Ferritin-like domain (PF00210; HMM-score: 110.4)and 5 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available