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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS05565 [old locus tag: NWMN_0992 ]
- pan locus tag?:
- symbol: NWMN_RS05565
- pan gene symbol?: —
- synonym:
- product: DNA invertase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS05565 [old locus tag: NWMN_0992 ]
- symbol: NWMN_RS05565
- product: DNA invertase
- replicon: chromosome
- strand: -
- coordinates: 1098898..1100283
- length: 1386
- essential: unknown
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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1381ATGAAAGTAGCAATTTATACTAGAGTGAGTACACTTGAACAAAAAGAAAAAGGACACTCT
ATCGAAGAACAAGAAAGAAAATTAAGAGCTTACAGCGACATAAACGACTGGAAAATTCAT
AAAGTATATACTGACGCTGGATACTCCGGAGCTAAAAAAGACAGACCCGCTTTACAAGAA
ATGTTGAATGAAATAGATAATTTTGATTTGGTTTTAGTCTATAAACTAGATCGATTAACT
CGAAGTGTTAAAGACTTACTAGAGATACTAGAATTGTTTGAGAATAAAAACGTGTTGTTT
AGGAGCGCAACAGAAGTATATGACACAACTTCTGCTATGGGACGTTTGTTCGTAACATTA
GTAGGTGCTATGGCAGAGTGGGAGCGTACTACAATTCAAGAGCGTACTGCAATGGGTCGA
CGCGCATCAGCTAGAAAAGGGTTAGCTAAAACTGTCCCTCCTTTCTATTACGACAGAGTA
AACGATAAATTTGTGCCTAATGAATATAAAAAAGTATTACGATTTGCAGTAGAAGAAGCG
AAAAAAGGTACTAGTTTAAGAGAAATAACTATAAAATTGAACAACTCTAAATACAAAGCA
CCCTTAGGTAAAAACTGGCACAGATCAGTTATAGGCAATGCTCTAACGAGTCCGGTAGCT
AGAGGTCATCTTGTTTTCGGTGACATATTCGTCGAAAACACCCACGAAGCTATTATAAGT
GAAGAAGAATACGAAGAAATAAAATTAAGGATAAGTGAAAAAACTAACTCTACAATCGTA
AAACATAACGCTATTTTCAGAAGTAAACTATTATGTCCAAACTGTAACCAGAAATTGACT
TTAAACACAGTCAAGCATACGCCTAAAAATAAAGAAGTTTGGTATTCTAAACTATACTTT
TGTTCTAACTGCAAAAATACTAAAAATAAAAATGCATGTAACATCGACGAAGGCGAGGTT
TTAAAACAATTTTACAATTATCTAAAACAATTTGATTTAACATCATATAAAATCGAAAAC
CAACCTAAAGAAATAGAAGATGTCGGCATCGATATTGAAAAGTTGCGAAAAGAACGCGCT
AGATGTCAAACACTTTTTATAGAAGGTATGATGGATAAGGATGAAGCTTTTCCAATAATA
AGTCGTATTGACAAAGAAATACATGAGTATGAAAAGCGCAAGGATAATGATAAGGGTAAG
ACTTTTAACTATGAGAAGATTAAAAATTTCAAGTATTCATTGCTAAACGGCTGGGAATTA
ATGGAAGATGAGTTAAAAACTGAATTCATAAAGATGGCAATCAAAAACATTCATTTTGAA
TATGTAAAAGGAATTAAAGGGAAGCGCCAGAACTCATTGAAGATTACGGGTATAGAGTTT
TATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS05565 [old locus tag: NWMN_0992 ]
- symbol: NWMN_RS05565
- description: DNA invertase
- length: 461
- theoretical pI: 9.54826
- theoretical MW: 53970.6
- GRAVY: -0.660087
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM: no clan defined Resolvase; Resolvase, N terminal domain (PF00239; HMM-score: 146.5)and 7 moreRecombinase; Recombinase (PF07508; HMM-score: 49)Zn_Beta_Ribbon (CL0167) Zn_ribbon_recom; Recombinase zinc beta ribbon domain (PF13408; HMM-score: 18.3)RNase_H (CL0219) DDE_Tnp_1_6; Transposase DDE domain (PF13751; HMM-score: 15.4)Zn_Beta_Ribbon (CL0167) Zn_Tnp_IS1595; Transposase zinc-ribbon domain (PF12760; HMM-score: 14.4)DZR; Double zinc ribbon (PF12773; HMM-score: 11.5)zinc-ribbons_6; zinc-ribbons (PF07191; HMM-score: 9.5)zf-GRF; GRF zinc finger (PF06839; HMM-score: 9.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.009895
- TAT(Tat/SPI): 0.000856
- LIPO(Sec/SPII): 0.002188
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKVAIYTRVSTLEQKEKGHSIEEQERKLRAYSDINDWKIHKVYTDAGYSGAKKDRPALQEMLNEIDNFDLVLVYKLDRLTRSVKDLLEILELFENKNVLFRSATEVYDTTSAMGRLFVTLVGAMAEWERTTIQERTAMGRRASARKGLAKTVPPFYYDRVNDKFVPNEYKKVLRFAVEEAKKGTSLREITIKLNNSKYKAPLGKNWHRSVIGNALTSPVARGHLVFGDIFVENTHEAIISEEEYEEIKLRISEKTNSTIVKHNAIFRSKLLCPNCNQKLTLNTVKHTPKNKEVWYSKLYFCSNCKNTKNKNACNIDEGEVLKQFYNYLKQFDLTSYKIENQPKEIEDVGIDIEKLRKERARCQTLFIEGMMDKDEAFPIISRIDKEIHEYEKRKDNDKGKTFNYEKIKNFKYSLLNGWELMEDELKTEFIKMAIKNIHFEYVKGIKGKRQNSLKITGIEFY
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.