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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS05565 [old locus tag: NWMN_0992 ]
  • pan locus tag?:
  • symbol: NWMN_RS05565
  • pan gene symbol?: —
  • synonym:
  • product: DNA invertase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_RS05565 [old locus tag: NWMN_0992 ]
  • symbol: NWMN_RS05565
  • product: DNA invertase
  • replicon: chromosome
  • strand: -
  • coordinates: 1098898..1100283
  • length: 1386
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_009641 (1098898..1100283) NCBI
  • BioCyc:
  • MicrobesOnline: see NWMN_0992

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAAAGTAGCAATTTATACTAGAGTGAGTACACTTGAACAAAAAGAAAAAGGACACTCT
    ATCGAAGAACAAGAAAGAAAATTAAGAGCTTACAGCGACATAAACGACTGGAAAATTCAT
    AAAGTATATACTGACGCTGGATACTCCGGAGCTAAAAAAGACAGACCCGCTTTACAAGAA
    ATGTTGAATGAAATAGATAATTTTGATTTGGTTTTAGTCTATAAACTAGATCGATTAACT
    CGAAGTGTTAAAGACTTACTAGAGATACTAGAATTGTTTGAGAATAAAAACGTGTTGTTT
    AGGAGCGCAACAGAAGTATATGACACAACTTCTGCTATGGGACGTTTGTTCGTAACATTA
    GTAGGTGCTATGGCAGAGTGGGAGCGTACTACAATTCAAGAGCGTACTGCAATGGGTCGA
    CGCGCATCAGCTAGAAAAGGGTTAGCTAAAACTGTCCCTCCTTTCTATTACGACAGAGTA
    AACGATAAATTTGTGCCTAATGAATATAAAAAAGTATTACGATTTGCAGTAGAAGAAGCG
    AAAAAAGGTACTAGTTTAAGAGAAATAACTATAAAATTGAACAACTCTAAATACAAAGCA
    CCCTTAGGTAAAAACTGGCACAGATCAGTTATAGGCAATGCTCTAACGAGTCCGGTAGCT
    AGAGGTCATCTTGTTTTCGGTGACATATTCGTCGAAAACACCCACGAAGCTATTATAAGT
    GAAGAAGAATACGAAGAAATAAAATTAAGGATAAGTGAAAAAACTAACTCTACAATCGTA
    AAACATAACGCTATTTTCAGAAGTAAACTATTATGTCCAAACTGTAACCAGAAATTGACT
    TTAAACACAGTCAAGCATACGCCTAAAAATAAAGAAGTTTGGTATTCTAAACTATACTTT
    TGTTCTAACTGCAAAAATACTAAAAATAAAAATGCATGTAACATCGACGAAGGCGAGGTT
    TTAAAACAATTTTACAATTATCTAAAACAATTTGATTTAACATCATATAAAATCGAAAAC
    CAACCTAAAGAAATAGAAGATGTCGGCATCGATATTGAAAAGTTGCGAAAAGAACGCGCT
    AGATGTCAAACACTTTTTATAGAAGGTATGATGGATAAGGATGAAGCTTTTCCAATAATA
    AGTCGTATTGACAAAGAAATACATGAGTATGAAAAGCGCAAGGATAATGATAAGGGTAAG
    ACTTTTAACTATGAGAAGATTAAAAATTTCAAGTATTCATTGCTAAACGGCTGGGAATTA
    ATGGAAGATGAGTTAAAAACTGAATTCATAAAGATGGCAATCAAAAACATTCATTTTGAA
    TATGTAAAAGGAATTAAAGGGAAGCGCCAGAACTCATTGAAGATTACGGGTATAGAGTTT
    TATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1386

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_RS05565 [old locus tag: NWMN_0992 ]
  • symbol: NWMN_RS05565
  • description: DNA invertase
  • length: 461
  • theoretical pI: 9.54826
  • theoretical MW: 53970.6
  • GRAVY: -0.660087

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED:
  • PFAM:
    no clan defined Resolvase; Resolvase, N terminal domain (PF00239; HMM-score: 146.5)
    and 7 more
    Recombinase; Recombinase (PF07508; HMM-score: 49)
    Zn_Beta_Ribbon (CL0167) Zn_ribbon_recom; Recombinase zinc beta ribbon domain (PF13408; HMM-score: 18.3)
    RNase_H (CL0219) DDE_Tnp_1_6; Transposase DDE domain (PF13751; HMM-score: 15.4)
    Zn_Beta_Ribbon (CL0167) Zn_Tnp_IS1595; Transposase zinc-ribbon domain (PF12760; HMM-score: 14.4)
    DZR; Double zinc ribbon (PF12773; HMM-score: 11.5)
    zinc-ribbons_6; zinc-ribbons (PF07191; HMM-score: 9.5)
    zf-GRF; GRF zinc finger (PF06839; HMM-score: 9.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.009895
    • TAT(Tat/SPI): 0.000856
    • LIPO(Sec/SPII): 0.002188
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MKVAIYTRVSTLEQKEKGHSIEEQERKLRAYSDINDWKIHKVYTDAGYSGAKKDRPALQEMLNEIDNFDLVLVYKLDRLTRSVKDLLEILELFENKNVLFRSATEVYDTTSAMGRLFVTLVGAMAEWERTTIQERTAMGRRASARKGLAKTVPPFYYDRVNDKFVPNEYKKVLRFAVEEAKKGTSLREITIKLNNSKYKAPLGKNWHRSVIGNALTSPVARGHLVFGDIFVENTHEAIISEEEYEEIKLRISEKTNSTIVKHNAIFRSKLLCPNCNQKLTLNTVKHTPKNKEVWYSKLYFCSNCKNTKNKNACNIDEGEVLKQFYNYLKQFDLTSYKIENQPKEIEDVGIDIEKLRKERARCQTLFIEGMMDKDEAFPIISRIDKEIHEYEKRKDNDKGKTFNYEKIKNFKYSLLNGWELMEDELKTEFIKMAIKNIHFEYVKGIKGKRQNSLKITGIEFY

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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