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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS07095 [old locus tag: NWMN_1256 ]
- pan locus tag?: SAUPAN003720000
- symbol: NWMN_RS07095
- pan gene symbol?: —
- synonym:
- product: membrane protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS07095 [old locus tag: NWMN_1256 ]
- symbol: NWMN_RS07095
- product: membrane protein
- replicon: chromosome
- strand: +
- coordinates: 1379196..1379663
- length: 468
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421GTGCTCTATTTAATATTTTCAATCATTGTAGCTTTATTTATGGGAACTATAGTTATAGTT
ATTCGTATGAAAGCTCAAAATTATCCGGTAAATGAGAAAAAAATAGTTTTGCCACCGTTT
TTTATGGCGACCGGCGCATTGATGTACGTCGTTCCATATTTTAGGCTAACAGGATCGGAA
ATGCTAGAAGCCTTTATTGTTGGTTTGCTTTTTTCTACAGATCTAATTTGGACTTCTCGA
TTTGAAGTCAAAGGTACAGAAATTTATATGGAACGATCTATAGCCTTTCCAGTTATTTTG
ATTTCATTACTTATCATTCGTACTGTGATGAAAATATTCATTAGTAATGAAATAGATCCT
GGAGAATTAGGCGGCATGTTCTTTTTATTAGCATTCTGTATGATTGTTCCTTGGAGAGCA
GCAATGCTATATAAATACAAAAAACTAAAGAAAACATTAATCAATTAA60
120
180
240
300
360
420
468
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS07095 [old locus tag: NWMN_1256 ]
- symbol: NWMN_RS07095
- description: membrane protein
- length: 155
- theoretical pI: 9.93795
- theoretical MW: 17855.8
- GRAVY: 0.861935
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- PFAM: no clan defined DUF1453; Protein of unknown function (DUF1453) (PF07301; HMM-score: 190.9)and 1 moreRDD; RDD family (PF06271; HMM-score: 8.2)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 5
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.046709
- TAT(Tat/SPI): 0.00048
- LIPO(Sec/SPII): 0.00975
- predicted transmembrane helices (TMHMM): 5
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSEMLEAFIVGLLFSTDLIWTSRFEVKGTEIYMERSIAFPVILISLLIIRTVMKIFISNEIDPGELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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