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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS14930 [old locus tag: NWMN_2607 ]
  • pan locus tag?: SAUPAN006481000
  • symbol: NWMN_RS14930
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_RS14930 [old locus tag: NWMN_2607 ]
  • symbol: NWMN_RS14930
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2871739..2872134
  • length: 396
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_009641 (2871739..2872134) NCBI
  • BioCyc:
  • MicrobesOnline: see NWMN_2607

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    ATGAAATTAACATTAATGAAATTTTTTGTGGGGGGATTTGCAGTATTATTAAGTTATATT
    GTATCTGTAACACTACCTTGGAAAGAATTTGGCGGTATATTTGCAACGTTTCCGGCAGTA
    TTTTTAGTGTCTATGTTTATTACAGGTATGCAATATGGTGATAAAGTCGCTGTGCATGTA
    AGTCGTGGCGCAGTGTTTGGTATGACAGGGGTATTAGTTTGTATTTTAGTTACATGGATG
    ATGTTACATATGACGCACATGTGGTTGATTAGCATTGTTGTTGGTTTCCTAAGCTGGTTC
    ATCAGTGCAGTATGTATTTTTGAAGCGGTAGAATTTATAGCACAAAAAAGATTAGAAAAG
    CATAGTTGGAAAGCTGGAAAATCGAATAGTAAATAG
    60
    120
    180
    240
    300
    360
    396

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_RS14930 [old locus tag: NWMN_2607 ]
  • symbol: NWMN_RS14930
  • description: hypothetical protein
  • length: 131
  • theoretical pI: 10.2284
  • theoretical MW: 14693.7
  • GRAVY: 0.91374

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: data available for N315, NCTC8325, USA300_FPR3757
  • PFAM:
    GlpM-like (CL0420) DUF3147; Protein of unknown function (DUF3147) (PF11345; HMM-score: 142.9)
    and 1 more
    DMT (CL0184) UPF0060; Uncharacterised BCR, YnfA/UPF0060 family (PF02694; HMM-score: 12.5)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.047944
    • TAT(Tat/SPI): 0.001226
    • LIPO(Sec/SPII): 0.013618
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHVSRGAVFGMTGVLVCILVTWMMLHMTHMWLISIVVGFLSWFISAVCIFEAVEFIAQKRLEKHSWKAGKSNSK

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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