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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0332 [new locus tag: SA_RS01905 ]
  • pan locus tag?: SAUPAN001883000
  • symbol: SA0332
  • pan gene symbol?: fepB
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA0332 [new locus tag: SA_RS01905 ]
  • symbol: SA0332
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 389929..391044
  • length: 1116
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGTGGTCTTTCAAATCAATGTTCAATACACCAGAAGATCCGGAAAAAGATGCGTATGAA
    TTTTATGGTAAAGTGCAACCAGGCATTACCACACCCACGCAAAAAACATGCAATTTCGTT
    GCGTTAGATTTGAAGTCAAAAGATAGAGATGCAATTAAGGCAATGTTTAAAAAGTGGACG
    GTTATGGCTGATCGTATGATGGATGGTGATACAGTTGGCAAGACGAGTAACAATCCTTTA
    ATGCCACCAGTAGATACCGGTGAATCGATAGGATTAGGTGCAAGCAAGTTAACGATTACC
    TTTGGGATTAGTAAGTCTTTGATGAAGAAAATTGGGTTATCTAGTAAAATTCCCGATGCC
    TTTAAAGATTTACCGCATTTTCCGAATGATCAGTTAATAGACGATTACAGCGATGGTGAT
    ATTATGATTCAAGCATGCTCAAATGATTCGCAAGTATCCTTTCATGCGGTTCATAATTTA
    GTTCGTCCATTTCGAGATATTGTTAAGGTACGTTGGGCGCAATCTGGTTTTATCTCTGCT
    AAAGGTAAGGAAACACCTAGAAATTTAATGGCATTTAAAGATGGAACAATTAATCCTAGA
    AAGAGTAATCAACTTAAAGATTATGTGTTTATTGATGACGGATGGGCGAAACATGGAACT
    TATTGTGTTGTCAGACGTATTCAAATACACATTGAAACGTGGGATCGTACTGCACTGGAA
    GAACAAGAGGCTACATTTGGTCGGAAACGACATAGTGGTGCGCCGTTAACAGGTGGGAAA
    GAGTTTGATGAAATTGACTTAAAAGCGAAAGATAGTCATGGCGAGTATATTATTGATAAA
    GATGCCCATACGAGACTAGCGAAAGAAGCAAATACGTCAATTTTACGTAGAGCCTTTAAT
    TATGTTGATGGTACGGATGACCGCACAGGTAACTTCGAAACAGGCTTGTTGTTCATTGCT
    TTTCAAAAAGCGACAAAACAATTTATCGATATACAAAATAATTTAGGTAGTAATGATAAA
    TTAAATGAATATATTACACATAGAGGTTCTGCTTCATTTTTAGTATTACCAGGTGTTAGT
    AAGGGAGGATACCTTGGTGAAACATTATTTGACTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1116

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA0332 [new locus tag: SA_RS01905 ]
  • symbol: SA0332
  • description: hypothetical protein
  • length: 371
  • theoretical pI: 7.68279
  • theoretical MW: 41631.9
  • GRAVY: -0.522102

⊟Function[edit | edit source]

  • TIGRFAM:
    Tat-translocated enzyme (TIGR01412; HMM-score: 563.2)
    and 1 more
    Dyp-type peroxidase family (TIGR01413; HMM-score: 330.6)
  • TheSEED  :
    • Deferrochelatase/peroxidase EfeB
    Iron acquisition and metabolism Iron acquisition and metabolism - no subcategory Ferrous iron transporter EfeUOB, low-pH-induced  Ferrous iron transport peroxidase EfeB
  • PFAM:
    Dim_A_B_barrel (CL0032) Dyp_perox; Dyp-type peroxidase family (PF04261; HMM-score: 390.6)
    and 1 more
    no clan defined DUF4826; Domain of unknown function (DUF4826) (PF16108; HMM-score: 12.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Extracellular
    • Cytoplasmic Score: 0.1
    • Cytoplasmic Membrane Score: 0.14
    • Cellwall Score: 0.15
    • Extracellular Score: 9.6
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.008127
    • TAT(Tat/SPI): 0.000526
    • LIPO(Sec/SPII): 0.001595
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MWSFKSMFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLKSKDRDAIKAMFKKWTVMADRMMDGDTVGKTSNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAFKDLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISAKGKETPRNLMAFKDGTINPRKSNQLKDYVFIDDGWAKHGTYCVVRRIQIHIETWDRTALEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEANTSILRRAFNYVDGTDDRTGNFETGLLFIAFQKATKQFIDIQNNLGSNDKLNEYITHRGSASFLVLPGVSKGGYLGETLFD

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator: Fur* (repression) regulon
    Fur*(TF)important in Iron homeostasis; RegPrecise 

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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