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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1645 [new locus tag: SA_RS09255 ]
- pan locus tag?: SAUPAN004614000
- symbol: yent1
- pan gene symbol?: yent1
- synonym:
- product: enterotoxin Yent1
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1645 [new locus tag: SA_RS09255 ]
- symbol: yent1
- product: enterotoxin Yent1
- replicon: chromosome
- strand: -
- coordinates: 1878533..1878934
- length: 402
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 1124488 NCBI
- RefSeq: NP_374934 NCBI
- BioCyc:
- MicrobesOnline: 103960 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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361ATGAAGTTATTTGCCTTTATCTTCATATGTGTTAAGTCTTGCAGCTTACTATTTATGTTA
AATGGCAATCCTAAACCAGAACAATTGAATAAAGCGAGTGAATTCACTGGTCTAATGGAT
AATATGAGGTATTTGTATGATGATAAACACGTATCAGAAACAAACATTAAATCCCAAGAA
AAGTTTTTACAACATGATTTATTATTTAAAATAAATGGTTCTAAAATTTTAAAAACAGAA
TTTAATAATAAAAGCCTTTCGGATAAATATAAAAATAAAAACGTAGATTTGTTTGGGACA
AACTATTATAATCAATGCTATTTTTCATTGGATAATATGGAATTAAATGATGGTAGATTA
ATTGAAAAAAACGTGTATGTATGGCGGTGTGACCGAGCATGA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1645 [new locus tag: SA_RS09255 ]
- symbol: Yent1
- description: enterotoxin Yent1
- length: 133
- theoretical pI: 8.59378
- theoretical MW: 15738
- GRAVY: -0.518045
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Extracellular
- Cytoplasmic Score: 0.01
- Cytoplasmic Membrane Score: 0.09
- Cellwall Score: 0.18
- Extracellular Score: 9.72
- Internal Helix: 1
- LocateP: N-terminally anchored (No CS)
- Prediction by SwissProt Classification: Membrane
- Pathway Prediction: Sec-(SPI)
- Intracellular possibility: 0.5
- Signal peptide possibility: 0
- N-terminally Anchored Score: 2
- Predicted Cleavage Site: No CleavageSite
- SignalP: Signal peptide LIPO(Sec/SPII) length 13 aa
- SP(Sec/SPI): 0.348695
- TAT(Tat/SPI): 0.001295
- LIPO(Sec/SPII): 0.496178
- Cleavage Site: CS pos: 13-14. VKS-CS. Pr: 0.3004
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKLFAFIFICVKSCSLLFMLNGNPKPEQLNKASEFTGLMDNMRYLYDDKHVSETNIKSQEKFLQHDLLFKINGSKILKTEFNNKSLSDKYKNKNVDLFGTNYYNQCYFSLDNMELNDGRLIEKNVYVWRCDRA
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: sen < yent2 < yent1
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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