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NCBI: 26-AUG-2013

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA1731 [new locus tag: SA_RS09935 ]
  • pan locus tag?: SAUPAN004948000
  • symbol: SA1731
  • pan gene symbol?: pheA
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA1731 [new locus tag: SA_RS09935 ]
  • symbol: SA1731
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1982526..1983320
  • length: 795
  • essential: no DEG other strains

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGCAATTATATTATTTAGGCCCTAAAGGTACATTTTCATATTTGGCTTGTCGTCAGTAT
    TTTTCTGAAAATGAAGCAACTTTTCAACCAAAGTCAAATTTATTTGAAGTCATCAAGGCA
    GTTGCAGATGATGACACATCGATTGGTGTTGTCCCTATTGAAAATTCTATAGAAGGAACA
    ATCAACATTGTGGCAGATGCACTTGCACAGCAAGATGTCTTTGCACACGGTGAAATACGT
    TTAGATATTAACTTTGCATTATATGGTAATGGAACAGATTCCATTTCTGATATTAAAAAA
    GTGTATTCTATTGCACCAGCAATCAGTCAAACAACAAATTACATACATCAACATCAATTT
    GACTATGATTATGTCGACAGTACAATTCAAAGTTTGACTAAAATTGAAAATGGCGTTGCA
    GCAATTGCACCTTTAGGTAGTGGCGAAGCTTATGGTTTTACACCTATTGATACACATATT
    GAAGACTATCCACATAACGTGACACGTTTTTTAGTTATAAAAAATCAGCAGCAATTTGAT
    CAAAATGCGACATCATTGATGTTTTTAATTACACCAATGCATGATAAACCTGGGCTGTTA
    GCAAGTGTGCTTAATACATTTGCTTTGTTTAATATTAATTTATCCTGGATTGAGTCTCGT
    CCTTTAAAAACACAATTAGGTATGTATCGATTTTTCGTTCAGGCTGATTCTGCAATTACA
    ACCGATATAAAGAAAGTCATTGCTATTTTAGAAACCTTAGATTTCAAAGTAGAAATGATT
    GGTGCTTTTAATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    795

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA1731 [new locus tag: SA_RS09935 ]
  • symbol: SA1731
  • description: hypothetical protein
  • length: 264
  • theoretical pI: 4.50653
  • theoretical MW: 29473.2
  • GRAVY:

Function[edit | edit source]

  • TIGRFAM:
    phenylalanine-4-hydroxylase (TIGR01268; EC 1.14.16.1; HMM-score: 37.1)
  • TheSEED  :
    • Prephenate dehydratase (EC 4.2.1.51)
    Amino Acids and Derivatives Aromatic amino acids and derivatives Chorismate Synthesis  Prephenate dehydratase (EC 4.2.1.51)
    and 2 more
    Amino Acids and Derivatives Aromatic amino acids and derivatives Phenylalanine and Tyrosine Branches from Chorismate  Prephenate dehydratase (EC 4.2.1.51)
    Regulation and Cell signaling Regulation and Cell signaling - no subcategory Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators  Prephenate dehydratase (EC 4.2.1.51)
  • PFAM:
    PBP (CL0177) PDT; Prephenate dehydratase (PF00800; HMM-score: 143.3)
    and 2 more
    ACT (CL0070) ACT; ACT domain (PF01842; HMM-score: 28.1)
    no clan defined DUF16; Protein of unknown function DUF16 (PF01519; HMM-score: 17.2)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.67
    • Cytoplasmic Membrane Score: 0.01
    • Cellwall Score: 0.15
    • Extracellular Score: 0.17
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.012391
    • TAT(Tat/SPI): 0.000356
    • LIPO(Sec/SPII): 0.021804
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIRLDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHIEDYPHNVTRFLVIKNQQQFDQNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEMIGAFN

Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]