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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1834 [new locus tag: SA_RS10525 ]
- pan locus tag?: SAUPAN005254000
- symbol: SA1834
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1834 [new locus tag: SA_RS10525 ]
- symbol: SA1834
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 2070412..2071086
- length: 675
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 1124726 NCBI
- RefSeq: NP_375135 NCBI
- BioCyc: see SA_RS10525
- MicrobesOnline: 104161 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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661ATGATTAGAAATAGATTGTCTGAACTACTGTCAGAAAGAGGACTAAAAATATCTCGTGTT
GCAAAAGATGTAAAAATAGCAAGAAGTTCACTTACTTCAATGGCACAAAATGATTCTGAA
ATGATAAGATATGATGCTATAGATAAATTATGTAGTTATCTGCACATATCTCCTTCAGAA
TTTTTTGAACATAATCCGATCAATTTTGACTTTACTTTTGATGAAGAACCGAATTATAAA
ATTAATGATGTTTTCGAGGGATTTGAAGTAACTGCAAACATTACTCACGCTTTTTCGATT
GAAAATTTTGACTTTGAAATTTTAGTAGACGTCGAATTAGATAATAGGCAAAAATTAAAT
TTTGACTTAGACGTCTCATATAAAGAAACTGAAAAGATAACTAATTCACAACATAGATTT
ATTTTCACGATTAAAAATGAAGATGAAAATATCGGATTAAAAAAATACGTTGATAGTTTA
TCTGCAGGCCTTAAAAACTTGTTATTTAAAAAAATTAACCAAAAGTTAAGTGGGTATGTT
TCTGAAATAATAGTAAAAAATATAGACGATATTGAAGAGCTTTTTCCAAATAAAGGCGAA
AAAAGTACGACTCTACATAAAGAAATTTTACAAACTGATAGCCGTTTATCTAGTGATATT
TTTAAAGAATATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1834 [new locus tag: SA_RS10525 ]
- symbol: SA1834
- description: hypothetical protein
- length: 224
- theoretical pI: 4.76882
- theoretical MW: 26084.2
- GRAVY: -0.476786
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- Hypothetical SAV2027 homolog in superantigen-encoding pathogenicity islands SaPI
- ⊞PFAM: HTH (CL0123) HTH_26; Cro/C1-type HTH DNA-binding domain (PF13443; HMM-score: 42.2)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MIRNRLSELLSERGLKISRVAKDVKIARSSLTSMAQNDSEMIRYDAIDKLCSYLHISPSEFFEHNPINFDFTFDEEPNYKINDVFEGFEVTANITHAFSIENFDFEILVDVELDNRQKLNFDLDVSYKETEKITNSQHRFIFTIKNEDENIGLKKYVDSLSAGLKNLLFKKINQKLSGYVSEIIVKNIDDIEELFPNKGEKSTTLHKEILQTDSRLSSDIFKEY
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available