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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA2157 [new locus tag: SA_RS12385 ]
- pan locus tag?: SAUPAN005880000
- symbol: SA2157
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA2157 [new locus tag: SA_RS12385 ]
- symbol: SA2157
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 2423852..2425525
- length: 1674
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1125085 NCBI
- RefSeq: NP_375480 NCBI
- BioCyc: see SA_RS12385
- MicrobesOnline: 104506 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1621ATGATTAAACAGATAAATGTTTCTAATATGCAAAAGTTTGAATCTCAATTAATGAAAGCT
CAGTCTGAAGGTTATACACATGTCGTTCCATATGCAAATGAGATAATGATTTATCAATCG
ATGTTAGATGCGGTTCAATTATATCCTAAGTCTATCGTGGTTGATTATACTGTGGATGGA
CAATACAAAAATGATTGTCACTATTTCGGTCAATCATCGATCAACATTGCCGATTGGGCT
CAAAACAATAATTATTATCCTAACCTGATATATGCGATTCAACAGACTCTTGATTTAATA
CATTATTACTCTGTAGAAACGATTTTCGATTTAGCTTTATTGACACTTCTGAAAGGTGAT
TTATCAATCGATGGTCATGTCGTTTTTGATTTTAAAGCCCCTATAGCAACAAGTGCTTCA
ATATGGGAAACTATTAAAACTATTGAAGATTTTGATATGATGTCTCAGTTTTATTTGAAT
AAAATGGCTTATATTGATCATCATCCTATACCTTTTCGCAACCTTTTTATCGAGGATTCA
GAACAACTTAATTCGCCAGATAATTGGTTGTATTCTACCAAGTTTATGCTACCTAAATGG
TTATATAAAATAGCAAAGCAACGTGCTGATAACAAACAATTACAAAACTTCGGCCTGTAT
ACGAAGCAACCAAACGTTTTAAAAGATCACATCGTTTTTATCGGTGATCATCATCAATAT
ATAGGTAATTCAAAATATTTATTTACTTACTTCGTTAAACATAATCCAATGACTGCCTGT
TATTTTGTTACTGACGATCGTCGCGGACCACATTTCATATCACCTAAGTCTGAAAAAGCT
GACGAATTGATTAACAGCGCACGCGTAGTTATAGTTGAAAATGATATACCTGAAACGTTA
CAACCAAACGGTACTTTAATTCAATTACATCAAGGCACACCAATAATGCAATTATTTTTA
GATAGTAAAGAGCCTATTAAAAATATAGAAACACCTTTTTATCGTGCTAAAAGGTATAAT
CGCTGGTTGCAATTCGATTATGTTATACATTCTGCTGATGATATTAGCCACTTTTATCAA
ACGGCTTTTCCTAGTCACCAAGCAAATGTATTGGCTTATGGTAATCCTAAACACCAATAT
TTACTACAAAAGCGTAACGAAAGTACTACTCAACAACAGTATAAGAAATCGTTTAAAATA
AATGATCAAAAACCAGTTTTATTATACGCACCTATTGGATTAGTGAGTGCGCAACAATTA
CCACTATCAGATGCTTTATTCAAAGCCTATCATGTTGTGGTTCAGGGTGTTGATGAAGCG
ATCTTACCAGAAGAGGCGCTTGTTGCACCAAAGTATCTTAGTGCTCAAGACTTAATTCTA
ATGTCTGATGTCGTTATCACTGATTACTCAAATATAATATTTGATGCGATGGCTATAGAC
AAAACAGTAGCATTATACACTCCAAATCACAGTCAATACATTGAGTCTCAAGGTGTTAAC
GAAGATATTTGGCGTCATCTATCAAAAATTTGGTATACAGACCGACAATTATTAATTAAT
AATTTAATTTCCCAGGCAATACCAGTGATTAAATATCCACAAATACAACATAAAGAACAA
CCATTAGAATCTATTTCACAACTTATATTGTCTAAGATGACATCTAATCAATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA2157 [new locus tag: SA_RS12385 ]
- symbol: SA2157
- description: hypothetical protein
- length: 557
- theoretical pI: 6.42839
- theoretical MW: 64605.2
- GRAVY: -0.298923
⊟Function[edit | edit source]
- TIGRFAM: Mobile and extrachromosomal element functions Prophage functions phage-associated protein, BcepMu gp16 family (TIGR04111; HMM-score: 16.8)
- TheSEED :
- Putative glycosyl/glycerophosphate transferase in teichoic acid biosynthesis
- PFAM: GT-B (CL0113) Glyphos_transf; CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase (PF04464; HMM-score: 98.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: -1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.009653
- TAT(Tat/SPI): 0.000572
- LIPO(Sec/SPII): 0.000854
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MIKQINVSNMQKFESQLMKAQSEGYTHVVPYANEIMIYQSMLDAVQLYPKSIVVDYTVDGQYKNDCHYFGQSSINIADWAQNNNYYPNLIYAIQQTLDLIHYYSVETIFDLALLTLLKGDLSIDGHVVFDFKAPIATSASIWETIKTIEDFDMMSQFYLNKMAYIDHHPIPFRNLFIEDSEQLNSPDNWLYSTKFMLPKWLYKIAKQRADNKQLQNFGLYTKQPNVLKDHIVFIGDHHQYIGNSKYLFTYFVKHNPMTACYFVTDDRRGPHFISPKSEKADELINSARVVIVENDIPETLQPNGTLIQLHQGTPIMQLFLDSKEPIKNIETPFYRAKRYNRWLQFDYVIHSADDISHFYQTAFPSHQANVLAYGNPKHQYLLQKRNESTTQQQYKKSFKINDQKPVLLYAPIGLVSAQQLPLSDALFKAYHVVVQGVDEAILPEEALVAPKYLSAQDLILMSDVVITDYSNIIFDAMAIDKTVALYTPNHSQYIESQGVNEDIWRHLSKIWYTDRQLLINNLISQAIPVIKYPQIQHKEQPLESISQLILSKMTSNQ
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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