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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA2449 [new locus tag: SA_RS14030 ]
- pan locus tag?: SAUPAN006399000
- symbol: SA2449
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA2449 [new locus tag: SA_RS14030 ]
- symbol: SA2449
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 2763624..2763998
- length: 375
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1125378 NCBI
- RefSeq: NP_375775 NCBI
- BioCyc: see SA_RS14030
- MicrobesOnline: 104801 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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361TTGAATTTCAGAACAGATAGTATCGATGATCTGGATAAGTTCAAAAAAGAATTCAAACCT
GTTATGCACTTAAAAGGTGATGCATTCAATCAACAGTTACAATCTTTGATTAACAAATAT
CCACAAATACAAAAAAATATGAAATCAGAGTTCATTGCTTATTATGATAAAGAAAAAAAT
AGAGAAACAGTAAAAAACTATGCTTGGAACCTTCAAAAATCTATAAATGACATTATGCAA
TCATATCCTAGCACAAAATTTGTACAGTTTTATAAAGATGATGTTTCCCCGTCAATGGTA
GATGGAAATGGCCGTTTAAAATCGGATACTAATGTAATTTCCATCGAGGGAGGAAAGTAT
GATGAGAACAAATAA60
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375
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA2449 [new locus tag: SA_RS14030 ]
- symbol: SA2449
- description: hypothetical protein
- length: 124
- theoretical pI: 9.20068
- theoretical MW: 14594.4
- GRAVY: -0.993548
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- hypothetical protein
- PFAM: AB_hydrolase (CL0028) COesterase; Carboxylesterase family (PF00135; HMM-score: 14.3)no clan defined DUF2205; Predicted coiled-coil protein (DUF2205) (PF10224; HMM-score: 13.6)HTH (CL0123) HrcA_DNA-bdg; Winged helix-turn-helix transcription repressor, HrcA DNA-binding (PF03444; HMM-score: 13.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.015113
- TAT(Tat/SPI): 0.000774
- LIPO(Sec/SPII): 0.004
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNFRTDSIDDLDKFKKEFKPVMHLKGDAFNQQLQSLINKYPQIQKNMKSEFIAYYDKEKNRETVKNYAWNLQKSINDIMQSYPSTKFVQFYKDDVSPSMVDGNGRLKSDTNVISIEGGKYDENK
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.